Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02077 ATGCACCATTTGTCGGAGCACCCCAATGTGGCAAGAATAGAGGGAACCTATGAGGACAAATTCACCATCAATTTGGTCATGGAGCTCTGTGCCGGGGGTGAGCTTTTCTATAGGATCAGTGAGAAGGGCCATTATAGTGAGAGAGAGGCTGCAAAGTTGATGAAGAACATTGTTGGAGTGGTCCAGGCCTGTCACTCTCTTGGTGTTATTCATCGAGATCTCAAGCCTGAGAATTTCTTGTTTGATACCACTGCCAAGAATGCTCAGATGAAGGCTATTGACTTTGGCTTCTCTGTCTTCTACAAGCCAGGACAAACATTTGATGATATAGTCGGAACCCCCTTTTATATGGCCCCTGAGGTGTTTCACAGACAATCTGGACCAGAAGTAGACGTATGGAGTGCTGGTGTTATCCTATACATCTTATTGAGAGGGATCCCACCTTTCTGGGCTGCAACCGAATCAGGAATTTTTCAACAGATTTTACATGGAGAGATTGATTTGGTTTCTGATCCATGGCCAAGTATCTCAGAAAGTGCTAAGGATTTGATAAAACGGATGTTGGATAGGGACCCCAAGAAAAGAATTTCTGCTCATGAAGTCTTGTGTCACCCTTGGATTGTTGATGATAATGTGGCCCCGGACAAACCTCTGGATCCCGCTGTTTTGACACGCCTAAAGCATTTCTCAACAATGAATAAACTTAAGAAGATGGCATTACATGTCATAGCAGAGAGACTTTCGGAGGAAGAGATAGGTGGATTAAAAGAGTTATTCAAAATGATTGACAAAGATAATAGTGGGACAATAACTTTTGAGGAACTCCAGGAAGGTTTGAAAAGTGTGGGCTGTGATCTCATGGAATCTGAAATTAAATCACTTATGGATGCGGCTGATATAGACAACAATGGAACAATAGACTATGGTGAATTTCTTGCTGCTACGCTGCATTTGAATAAGATGGAAAGAGAAAATAATTTGGTTGCTGCTTTTGCCTATTTTGATAAAGATGGTAGTGGTTCCATCACCATTGATGAGATTCAACAGGCTTGTAAAGACTTTGGCCTAGGTGATGTGCAGTTGGATGATATGATCAAAGAGATTGATCAAGACGATGATGGGAAAATTGATTATGCGGAGTTTGCAGCAATGATGAGAAAGGGTAATCCAGATGTTGGTAGGAGCAGGAGTAAGAAAGAGAATTTGAATTTCAATATTTCAGATGCATTTGGCGTGAAGAAGTCTTGA 1248 0.4159 MHHLSEHPNVARIEGTYEDKFTINLVMELCAGGELFYRISEKGHYSEREAAKLMKNIVGVVQACHSLGVIHRDLKPENFLFDTTAKNAQMKAIDFGFSVFYKPGQTFDDIVGTPFYMAPEVFHRQSGPEVDVWSAGVILYILLRGIPPFWAATESGIFQQILHGEIDLVSDPWPSISESAKDLIKRMLDRDPKKRISAHEVLCHPWIVDDNVAPDKPLDPAVLTRLKHFSTMNKLKKMALHVIAERLSEEEIGGLKELFKMIDKDNSGTITFEELQEGLKSVGCDLMESEIKSLMDAADIDNNGTIDYGEFLAATLHLNKMERENNLVAAFAYFDKDGSGSITIDEIQQACKDFGLGDVQLDDMIKEIDQDDDGKIDYAEFAAMMRKGNPDVGRSRSKKENLNFNISDAFGVKKS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02077 415 SUPERFAMILY EF-hand 246 386 IPR011992 -
Cca02g02077 415 PANTHER BNAA09G05220D PROTEIN 1 399 - -
Cca02g02077 415 ProSitePatterns EF-hand calcium-binding domain. 263 275 IPR018247 -
Cca02g02077 415 SMART efh_1 290 318 IPR002048 GO:0005509
Cca02g02077 415 SMART efh_1 254 282 IPR002048 GO:0005509
Cca02g02077 415 SMART efh_1 360 388 IPR002048 GO:0005509
Cca02g02077 415 SMART efh_1 326 354 IPR002048 GO:0005509
Cca02g02077 415 ProSiteProfiles EF-hand calcium-binding domain profile. 360 391 IPR002048 GO:0005509
Cca02g02077 415 CDD STKc_CAMK 1 206 - -
Cca02g02077 415 Pfam EF-hand domain pair 327 386 IPR002048 GO:0005509
Cca02g02077 415 Pfam EF-hand domain pair 255 315 IPR002048 GO:0005509
Cca02g02077 415 ProSitePatterns EF-hand calcium-binding domain. 299 311 IPR018247 -
Cca02g02077 415 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 399 - -
Cca02g02077 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Cca02g02077 415 Gene3D Transferase(Phosphotransferase) domain 1 35 214 - -
Cca02g02077 415 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Cca02g02077 415 ProSiteProfiles EF-hand calcium-binding domain profile. 286 321 IPR002048 GO:0005509
Cca02g02077 415 ProSiteProfiles EF-hand calcium-binding domain profile. 250 285 IPR002048 GO:0005509
Cca02g02077 415 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02077 415 ProSitePatterns EF-hand calcium-binding domain. 369 381 IPR018247 -
Cca02g02077 415 ProSitePatterns EF-hand calcium-binding domain. 335 347 IPR018247 -
Cca02g02077 415 Pfam Protein kinase domain 2 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02077 415 SUPERFAMILY Protein kinase-like (PK-like) 1 231 IPR011009 -
Cca02g02077 415 ProSiteProfiles EF-hand calcium-binding domain profile. 322 357 IPR002048 GO:0005509
Cca02g02077 415 SMART serkin_6 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g02077 415 Gene3D - 215 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02077 Cca-Chr2 40862718 40867433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02077 1 415 EF-hand Containing Proteins AT4G09570 75.904 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Cca02g02077 Pkinase 2.3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02077 K13412 - gmx:100811596 699.123