Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02071 ATGGAGAGTCTCAAGTTGGCATCATTGACGCTGTCTCCTCCTTCTCGACGCTCTGGGATGCTAGGGAAGCAGTTGAATTCCCCTTTACTTACAATTGATTCTGCAGCACAGTTTTGCAATTGCAGGGCTGATCTTGCTGCTGCATCATCAAGTATTCCGCTGCCAAATATCAGATTTTCACCAAGTGTAGCAACATCAACATGGACCTCAAATCTTTCTACCAAACATTGGATATTGCACTCAACTGCACAGATAGAAAATATAATCACAAGTAATGAAGATCAGAGTATGTGGGAAGCATGTAGACAAGCTCTGTCTGCATTTAACTTTAGTGATGAAGAAAAGGACAAGATACTCGGAAAAGCATTTGGTCTTGTTCATTCCCCTTATTGGGGAGAAGAACGTCAAAAGGAAGTTCCGAAACTCGAGACAGTAAATGGAATACTGGACTATCTAAGGAGTTTAAATCTTTCTGATGATGATCTGTCCAAGTTGCTTAAAAAGTTTCCAGAAGTTCTTGGATGTAATTTAGAGGAAGAGTTAAAAGGCAATGTAAAGATCCTAGAGGAGCAGTGGAGTATTGAAGGAAAATCTCTTAGGAACCTTCTCCTTAGAAATCCAAAGGTTTTGGGTTACAACGTTGATTGTAAGGGAGACTGTATTGCACAATGCACTAGATGCTGGGCTCGCTTCTAG 696 0.408 MESLKLASLTLSPPSRRSGMLGKQLNSPLLTIDSAAQFCNCRADLAAASSSIPLPNIRFSPSVATSTWTSNLSTKHWILHSTAQIENIITSNEDQSMWEACRQALSAFNFSDEEKDKILGKAFGLVHSPYWGEERQKEVPKLETVNGILDYLRSLNLSDDDLSKLLKKFPEVLGCNLEEELKGNVKILEEQWSIEGKSLRNLLLRNPKVLGYNVDCKGDCIAQCTRCWARF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02071 231 PANTHER CGI-12 PROTEIN-RELATED 18 230 IPR003690 GO:0003690|GO:0006355
Cca02g02071 231 Pfam mTERF 149 214 IPR003690 GO:0003690|GO:0006355
Cca02g02071 231 Gene3D Transcription termination factor 3, mitochondrial 73 226 IPR038538 -
Cca02g02071 231 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 18 230 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Cca02g02071 mTERF 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02071 - - gmx:100797265 397.127