Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02062 ATGTTTGAAAGAGTTCCTCAGGGTGATGCCATGATACTTAAGGTGGTGGTTGTGGAGTTTATATTGCCAGAAGAACAAAAACCAACTGAAGAATCCCAGCTTGTCTCTACTCTTGACAACCTCATGTTTATCACTGTTGGTGGAAGAGAGAGAACTCAGAAGCAATATGAGGATTTGTGCAAGCTTTTTGAATTTTCAAAACAAGTATTTTTGCTTAACGCCGCGTCGGAAAAGCCGCTGCTAAAGTTCTGA 252 0.4087 MFERVPQGDAMILKVVVVEFILPEEQKPTEESQLVSTLDNLMFITVGGRERTQKQYEDLCKLFEFSKQVFLLNAASEKPLLKF 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02062 83 Gene3D Vaccinia Virus protein VP39 14 62 IPR029063 -
Cca02g02062 83 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 14 81 - -
Cca02g02062 83 PANTHER O-METHYLTRANSFERASE 14 81 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02062 Cca-Chr2 40711583 40714599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02062 1 61 Monolignol Biosynthesis Gene Families AT1G51990 27.473 3.31e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02062 - K13066 gmx:100798347 103.219