Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02040 ATGATGGGTTATTCTCCAAGATTCTGTCTTGTTTTGCTTTTGTCCATTTGTGGGGCGGTTTCTTTGGCTTCCCCCGTTGAGGATCAAAGGAGAGATAGAATCACTCAGCTGCCAGGACAGCCTAAGAATGTGGGGTTTGCTCAGTATTCTGGCTATGTGAATGTGAATGGTGGGAGAGCACTGTTTTACTGGTTGGTTGAGGCACCAGTGAGGCGTGGACCAAGGTCAAGACCATTAGTGTTGTGGCTTAATGGTGGCCCCGGATGTTCCTCTATTGCTTATGGTGCTTCCGAGGAAATTGGCCCTTTTCACATTAGGCCTGATGGCAAGTCACTTTACTTGAATCCTTATGCTTGGAACAATTTGGCAAATATACTATTCCTTGATTCTCCTGCTGGTGTTGGTTTTTCATATGCCAATAAAACAACCGATCTATATACATTTGGTGACCAGAAAACAGCTGAAGATGCATACACTTTTCTTGTTAATTGGTTTGAAAGGTTTCCTCAGTATAAGCATAGAGAATTCTACATTGCTGGAGAAAGTTATGCAGGTCACTATGTTCCTCAGTTGGCTCAAATTGTTCACCAGAAAAATAAGGGAATCAAGAATCCGGTTATAAATTTTAAGGGATTTATGGTTGGGAATGCTGTTACCGATGATTATCATGATTATGTTGGCACATTTGAATATTGGTGGACCCATGGTTTGGTTTCAGATTCCACTTATAAGATGCTAAAAACTGCCTGCGATTTTGGGTCCTCCCTGCATCCACCAGTGCAATGCATGCAGGCTCTCAAAGTTGCAGTTGATGAGCAGGGAAACATTGATCCATATAGCATCTATACACAGCCTTGTAACAATACAGCATCACTCAGACGCGGTTTGAAGGGTCGCTATCCATGGATGTCTCGAGCATATGATCCATGTACTGAAAGGTATTCTGATGTGTATTTCAACCGTCCAGAAGTTCAGAAGGCACTTCATGCCAATGTAACTGGGATTCCTTATGCATGGAAGGCATGCAGTGATATTGTCGGGAACTATTGGACTGATTCTCCATTATCTATGCTTCCTATATATCAAGAACTTATTAATGCTAGCCTCCGAATATGGGTTTACAGTGGGGACACTGATGCTGTGGTTCCAGTGACTGCTACTCGATATTCAATTGACGCCTTGAAGCTACCTACCATCACCAATTGGTACCCTTGGTATGATAATGGCAAGGTTGGTGGGTGGAGTCAAGTTTATAATGGGTTGACATTGGTTACTGTAAGAGGAGCTGGACATGAGGTTCCTCTTCATAGGCCTCGTCAAGCATTTATTCTTTTTAGGTCATTCTTGGAGAACAAGTCCATGCCATCGTCAACTTAA 1377 0.4277 MMGYSPRFCLVLLLSICGAVSLASPVEDQRRDRITQLPGQPKNVGFAQYSGYVNVNGGRALFYWLVEAPVRRGPRSRPLVLWLNGGPGCSSIAYGASEEIGPFHIRPDGKSLYLNPYAWNNLANILFLDSPAGVGFSYANKTTDLYTFGDQKTAEDAYTFLVNWFERFPQYKHREFYIAGESYAGHYVPQLAQIVHQKNKGIKNPVINFKGFMVGNAVTDDYHDYVGTFEYWWTHGLVSDSTYKMLKTACDFGSSLHPPVQCMQALKVAVDEQGNIDPYSIYTQPCNNTASLRRGLKGRYPWMSRAYDPCTERYSDVYFNRPEVQKALHANVTGIPYAWKACSDIVGNYWTDSPLSMLPIYQELINASLRIWVYSGDTDAVVPVTATRYSIDALKLPTITNWYPWYDNGKVGGWSQVYNGLTLVTVRGAGHEVPLHRPRQAFILFRSFLENKSMPSST 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02040 458 Gene3D - 357 450 - -
Cca02g02040 458 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Cca02g02040 458 ProSitePatterns Serine carboxypeptidases, histidine active site. 421 438 IPR033124 GO:0004185
Cca02g02040 458 Pfam Serine carboxypeptidase 38 451 IPR001563 GO:0004185|GO:0006508
Cca02g02040 458 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 17 456 IPR001563 GO:0004185|GO:0006508
Cca02g02040 458 Gene3D - 310 346 - -
Cca02g02040 458 Gene3D alpha/beta hydrolase 29 288 IPR029058 -
Cca02g02040 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Cca02g02040 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Cca02g02040 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Cca02g02040 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 421 434 IPR001563 GO:0004185|GO:0006508
Cca02g02040 458 PANTHER CARBOXYPEPTIDASE 17 456 - -
Cca02g02040 458 SUPERFAMILY alpha/beta-Hydrolases 29 454 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02040 Cca-Chr2 40439621 40447489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02040 320 454 Calmodulin-binding Proteins AT2G22960 29.412 7.19e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02040 K16297 - gmx:100812000 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02040 02 40439621 40447489 Cca02g02040 02 40439621 40447489 ECH