Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02038 ATGGGTGATAAAGTCCAAGTTCTTCAGAAGAAGTTGGATCAAACTCCAACGTGGGCTGTTGCAGTTGTATGCCTTGTCATGCTTGCTATTTCAATCTTCATTGAACATGCTATTGAATCACTTGGAAAGTTGTTAAAAAAGAAACACAAAAAGGCTCTTCATGAAGCGCTGGAAAAGGTTAAAGGAGAGCTTATGCTGCTTGGATTCATATCCTTGCTCCTAGTGGTGTTTGAAGATCGTATTTCTGATATCTGCATCTCAAAAGAAGCTGCATCCTCATGGCATCCTTGTGGTCCCGATGATAAGCATAAAGATCCAAAAGGATATTATGACAAATGCGCTGAAAAGGGTAAAGTTGCTTTTGTGTCTGAATATGGGATTCACCAGCTCCATATATTCATCTTTGTGCTTGCTATTTTTCATATCCTACAGTGCATCATAACACTCACTTTGGGTAGAACTAAGATGTCAATATGGAGGATGTGGGAAGACGAATCAAAGAGTCTTGAACATCAGTTCTACCATGATCCTGAGAGGTTCAGGTTTGCTAGGGATACAACATTTGGACGAAGGCACTTGAGCTCATGGAGTCGATCACCAATTTCCTTATGGATAGTTAGCTTCTTCAGACAATTCTATGGGTCAGTTAATAAAGTTGATTATATGGCGTTACGGCATGGATTCATCGTGGCACATCTGACTCCAGCAAGTGAGGCAAAATTTGATTTCCAGAACTATATCAAGAGAACACTTGAAGAGGATTTTGTAGTTGTGGTGGGCATAAGTCCAATCATGTGGTTCTTTGCGGTGCTAATCCTGCTCACAAATACTCATGGGTGGTATGCTTATTTCTGGCTTCCATTTATCCCATTAATTATAATCTTGTTGGTGGGAACAAAGCTACAAATGATCATAACAGATATGGCACTAAGGATTCAAGATAGGGGGGAAGTGGTAAAGGGTGCACCTCTGGTTGAGCCAGGAGATGAATTGTTCTGGTTCAATCGTCCCCGCCTCGTCCTCTCTTTGATTCAACTTGTTCTCTTTCAGAATGCATTTCAACTAGCGTTTTTTGCTTGGAGCACATATGACAATGGGTTAAAAATAAACTCTTGCTTCCACAGAACTACTGCAGATATTGTCATTAGACTTACAATGGGGGTTCTCACACAAGTTCTATGCAGCTACGTCACTTTACCTCTTTATGCTCTAGTCACACAGATGGGTTCAACCATGAAACCAACAATTTTCAATGACAACGTAGCAGCAGCACTAAAGAAGTGGCATCACACCGCTAGAAAGCATATAAAACACAAGGATTCGAGTCATTCTGCAGCCAACACACCATTCTCAAGCAGGCCAGGAACTCCAACACATGGCATGTCTCCAGTTCACCTGCTTCACAAACACCCTAGACACAGTGATAGTCCTCTAACTTCTCCAAGGGCACCTCATTACCATAATGAACAATGGGATGTTGAAGGGTCACCTTCCCCAAGTCATCATGCAAGAAATCATGAAGACACCATGCAGCCTCCAACAGCAGAATTGACTCCTATTGGACTCCAACCTATTAGGACTCAACATGAAATCAACATTGCTTTGTCTGAATTTTCATTTGGGAGGGGACACCACACTAATAATAGTAACTAG 1653 0.4162 MGDKVQVLQKKLDQTPTWAVAVVCLVMLAISIFIEHAIESLGKLLKKKHKKALHEALEKVKGELMLLGFISLLLVVFEDRISDICISKEAASSWHPCGPDDKHKDPKGYYDKCAEKGKVAFVSEYGIHQLHIFIFVLAIFHILQCIITLTLGRTKMSIWRMWEDESKSLEHQFYHDPERFRFARDTTFGRRHLSSWSRSPISLWIVSFFRQFYGSVNKVDYMALRHGFIVAHLTPASEAKFDFQNYIKRTLEEDFVVVVGISPIMWFFAVLILLTNTHGWYAYFWLPFIPLIIILLVGTKLQMIITDMALRIQDRGEVVKGAPLVEPGDELFWFNRPRLVLSLIQLVLFQNAFQLAFFAWSTYDNGLKINSCFHRTTADIVIRLTMGVLTQVLCSYVTLPLYALVTQMGSTMKPTIFNDNVAAALKKWHHTARKHIKHKDSSHSAANTPFSSRPGTPTHGMSPVHLLHKHPRHSDSPLTSPRAPHYHNEQWDVEGSPSPSHHARNHEDTMQPPTAELTPIGLQPIRTQHEINIALSEFSFGRGHHTNNSN 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02038 550 Pfam Mlo family 108 470 IPR004326 GO:0006952|GO:0016021
Cca02g02038 550 Pfam Mlo family 10 104 IPR004326 GO:0006952|GO:0016021
Cca02g02038 550 PANTHER MLO-LIKE PROTEIN 1 109 541 IPR004326 GO:0006952|GO:0016021
Cca02g02038 550 PANTHER MLO-LIKE PROTEIN 1 9 101 IPR004326 GO:0006952|GO:0016021
Cca02g02038 550 MobiDBLite consensus disorder prediction 443 458 - -
Cca02g02038 550 MobiDBLite consensus disorder prediction 433 517 - -
Cca02g02038 550 PANTHER MLO-LIKE PROTEIN 109 541 - -
Cca02g02038 550 PANTHER MLO-LIKE PROTEIN 9 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02038 Cca-Chr2 40420524 40425584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02038 7 542 MLO family AT2G39200 57.804 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02038 K08472 - gmx:100816112 907.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02357 03 44540742 44547429 Cca02g02038 02 40420524 40425584 ECH
Cca02g02038 02 40420524 40425584 Cca02g02038 02 40420524 40425584 ECH
Cca02g02038 02 40420524 40425584 Cca08g01073 08 27731515 27743024 PCT