Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02018 ATGGAAATCACAATTACATCAAGAGAAACAATCAAACCACTGTTTCCCACGCCAGATGAACACAAATTCTTCCAACTCTCTCTATTTGATCAGCTTCAACTTACCACCTATTTGCCAATGGTTTTGTTTTACCCCAACAAGGAAGGCCTCATGGAACCTCCTCATATATGTGCTCAATTGAAACAATCACTCTCTGAGACACTATCCATTTTCTACCCTGTGGCAGGCAGAAGAAAGGACCAAACCTTTATCACATGCAATGACGAGGGTGCTGTTTTCTTGGAAGCCAAGGTGAACCATGACATGGTTGAGTTCCTCACACCACCTAGGCTAGAATTTCTAAACAAATTGCTCCCATGTGAGCCTAATAAGATGCACTCAGATGGAGAAGCTTTACCCCAAGTACTTGTACAAGTGAACGTGTTCAAATGTGGTGGAATAGCTTTAGGTACGTGCAATCTTCATACTCTTCTTGATGGTTGCTCTGGCAGCCTCTTCCAAACTTCTTGGGCTGCTATATGCCGTGGCAATAAGGAGCAAGTGTCATCTCCTGATTTCACTTCTGGCTCTTCTTTCTTTCCACCACTGAATCATTTGAGTTTGCATGATCAAAACAATGAGGGTTCAAGTGCACAAAAGAAGTGCACCACAAGAAGGTTTGTGTTTGATGCAGAATCCATCAACACTCTAAGAGATGATGGTAATGAAACCTCAAAACCTCTAACCAGATATGAAGCACTGGCTGCTTTCATTTGGAAACACATGACACTTGCATGCAAGATGGAATGTGAGGATAATAGCACAAGGCCAACACTTGCTATCCATGTTGTGGACATGAGAAGGAGAATTGGTGAACCTTTCTCTAAATACACAATCGGTAACATTTTGTGGACTGTAATGGTATATTGTGAAACACTCAATGCAGACACTAGTGTTAGATATTTGGTTAGCATTGCCAGAGAGAAATTTGGAAAGCTTTCAAAGGAATTGTTTTTAAGAGTGAAAAGTGACCCCAATATCTTGGGGAGCACTCAGTGTGTGGATTTGCCTCAAGGAATAGAAACAAGAAGTCCAATTCCCATTGTGTTGACAAGTTGGTGCGGTTTGAATTTCAGTGAGCTAGATTTTGGTTGGGGGAAGCCTCTGTGGATTGGTGTTAGAGGAGGTGATCAGGAATGTCTCCCTAATGTAGCTGTTATCATGGAAACAGATGCAGGCATGGAAGCTTGGTTGACAATGGAAATGCAACATATACATAATTTGGAAAAAGACATGGAGTTTCTCAGATTAGCTTTGCCTAATCCTAGTGTTTCAAACATATCGTTTTGA 1329 0.4138 MEITITSRETIKPLFPTPDEHKFFQLSLFDQLQLTTYLPMVLFYPNKEGLMEPPHICAQLKQSLSETLSIFYPVAGRRKDQTFITCNDEGAVFLEAKVNHDMVEFLTPPRLEFLNKLLPCEPNKMHSDGEALPQVLVQVNVFKCGGIALGTCNLHTLLDGCSGSLFQTSWAAICRGNKEQVSSPDFTSGSSFFPPLNHLSLHDQNNEGSSAQKKCTTRRFVFDAESINTLRDDGNETSKPLTRYEALAAFIWKHMTLACKMECEDNSTRPTLAIHVVDMRRRIGEPFSKYTIGNILWTVMVYCETLNADTSVRYLVSIAREKFGKLSKELFLRVKSDPNILGSTQCVDLPQGIETRSPIPIVLTSWCGLNFSELDFGWGKPLWIGVRGGDQECLPNVAVIMETDAGMEAWLTMEMQHIHNLEKDMEFLRLALPNPSVSNISF 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02018 442 Gene3D - 1 204 IPR023213 -
Cca02g02018 442 Gene3D - 212 430 IPR023213 -
Cca02g02018 442 Pfam Transferase family 1 427 - -
Cca02g02018 442 PANTHER F21J9.9 4 435 - -
Cca02g02018 442 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02018 Cca-Chr2 40046026 40047354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02018 1 423 Monolignol Biosynthesis Gene Families AT5G48930 25.670 1.81e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02018 - K13065 gmx:102668997 763.066