Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02014 ATGAAGGGAAACCTTCTCAAATGCTGGCTAAGGGAATTTTGTGGAATCCGGGAACATGTTGGCACATGTGAGAAGTCACACGTGCCCAAAGATGTCCCAAAGGGTCACCTAGTTGTGTACGTGGGTGAGGATTGCAAGAGATTTGTGATCAAAGTGGGTACACTCAACCATCCACTCTTCCAAGCCTTGTTGGACCATGCAGAGGATGTGTTTGGATTCAACAATAATGATTCTAAACTTCGCATCCCTTGCAATGAGAACATTTTCCTTCACATTCTTCACAATGCTGGTGAACTAGTCCATGATAGGAGGCCCTTCAATTGTTCATTTCTAGCAATTTTCCATTCTGAGATATAG 357 0.4342 MKGNLLKCWLREFCGIREHVGTCEKSHVPKDVPKGHLVVYVGEDCKRFVIKVGTLNHPLFQALLDHAEDVFGFNNNDSKLRIPCNENIFLHILHNAGELVHDRRPFNCSFLAIFHSEI 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02014 118 Pfam Auxin responsive protein 23 93 IPR003676 GO:0009733
Cca02g02014 118 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 14 108 IPR003676 GO:0009733
Cca02g02014 118 PANTHER SMALL AUXIN-UP RNA-RELATED 14 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02014 Cca-Chr2 39996400 39996756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02014 22 93 Calmodulin-binding Proteins AT5G20810 45.833 7.11e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02014 - K14488 mtr:MTR_1g094750 135.961