Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01956 ATGGCACCCTCCATAACCTCTGTTGTCCCTTTGCTTTTTTTCCTCGTTTTCACAGTTGTAGAAGTGGAAGGGGCTAAGAAGACATATGGGGTATTAGACAACAACCCTTTAAAACTATTTGTTTTTGGGGACTCCTACGTTGACACAGGGAATTTCGTGCATTCAGAGTCATATAAGGTTCCCAATGGAATCACTTTTCCTGGTACACCTGCAGGCAGATTCTCCGATGGTCACGTCCTCACTGATTTCTTTGCTTCCTATCTGAAAATTGGATCCCCCACACCATATGCATTCATAAATTCAACTAATCTGCAGTCCGGTGTAAACTTTGCCTATGGAGGGACAGGTGTTTTCGATACTTCCATTGATGGACCAAACACTACTGCCCAAATCGACTCATTTCAGAAGCTAATCGAACAAAATAACATCACCAAACAAGATCTTCAATCCTCAATTGCTCTTGTCAATGCTGGTGCTAATGATTATACAAATGCAGTAAAAGATGGGAAAATTTTCGATTTAAAAGGGTTCAGGGAATCCCTTGTGCAGCAAATATCTGTAAATCTGAAACGCATATACAGCTTAGGGGTACCGAAAGTAGCAGTTACGTTATTACAGCCAATTGGGTGTTTGCCTGAGTTAAATGCGATACTTCTTCATCAGAGCTGCGTTGATCTTTTGAACAAGGTCTCCATAGATCACAACAAATTGTTGCTCCAAGCTGTTCAAGATCTCAACAATCAAACGGGCCAATCACCTTTCATGATGCTAGACCTCTACACTTCCTTCCTCTCTGCAATCAACATCGTCGACACACAACGTCAAGCAAACTCAACATTGATGAATCCGTTGGAAGCATGCTGCGAGGGAACGACTTTGGCAGATTCATGTGGAACAGTGGATGACAAAGGACAAAAGAAATATCGTTTATGTGATAACCCAACACTTTCTTTCTTTTGGGACTTAGTTCACCCTTCTCAAAATGGTTGGTCTATAATCTTCCCAATAGTGCAAGCTTCTCTTGGCCACCTTACATAG 1038 0.4171 MAPSITSVVPLLFFLVFTVVEVEGAKKTYGVLDNNPLKLFVFGDSYVDTGNFVHSESYKVPNGITFPGTPAGRFSDGHVLTDFFASYLKIGSPTPYAFINSTNLQSGVNFAYGGTGVFDTSIDGPNTTAQIDSFQKLIEQNNITKQDLQSSIALVNAGANDYTNAVKDGKIFDLKGFRESLVQQISVNLKRIYSLGVPKVAVTLLQPIGCLPELNAILLHQSCVDLLNKVSIDHNKLLLQAVQDLNNQTGQSPFMMLDLYTSFLSAINIVDTQRQANSTLMNPLEACCEGTTLADSCGTVDDKGQKKYRLCDNPTLSFFWDLVHPSQNGWSIIFPIVQASLGHLT 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01956 345 Gene3D SGNH hydrolase 36 342 IPR036514 -
Cca02g01956 345 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 11 344 - -
Cca02g01956 345 Pfam GDSL-like Lipase/Acylhydrolase 39 333 IPR001087 GO:0016788
Cca02g01956 345 PANTHER OSJNBB0059K02.9 PROTEIN 11 344 - -
Cca02g01956 345 SUPERFAMILY SGNH hydrolase 35 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01956 Cca-Chr2 39152863 39156028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01956 39 337 Pollen Coat Proteome AT1G75930 26.380 1.33e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01956 - - gmx:100790363 469.159