Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01948 ATGGCCACTCTTACCTCCAACGACCACCTCATCTTCACTGCTCTAGCAATCTTCATATCAGCCCTAATTTTCTTCCTCACTCAGAAAACTAAGTCCAAAAAGTGCAACCTCCCTCCAGGGCCCCCCGGGTGGCCTATTGTTGGGAACCTCTTCCAAGTAGCTCGCTCTGGCAAGCCTTTCTTTGAGTTTGTCAACGATGTGAGGCTCAAATATGGTTCAATCTTCACCCTCAAGATGGGGACAAGGACCATGATCATCCTCACCGATGCAAAGCTGGTCCATGAAGCTATGATCCAAAAGGGTGCTACTTATGCCACAAGGCCTCCTGAGAACCCCACAAGGACCATCTTCAGTGAGAACAAGTTCACTGTGAATGCTGCACTGTACGGCCCCGTGTGGAAGTCTCTCAGGAGGAACATGGTGCAGAACATGCTGAGCTCCACCAGGCTGAAGGAGTTTCGCAGTGTTAGGGACAACGCTATGGACAGGCTCATCAAGAGGCTTAGAGACGAGGCTGAGAAGAATAACGGAGCGGTTTGGGTGCTCAAAGATGCCAGGTTTGCTGTGTTTTGCATACTTGTGGCCATGTGTTTTGGTCTTGAGATGGATGAGGAAACTGTTGAGAGGATAGATCAGGTTATGAAGAATGTTCTCATCACTTTGGATCCCAGAATTGATGACTATCTTCCAATTCTAAGTCCATTTTTCTCAAAGCAAAGAAAGAGAGCCTTGGAGGTTCGTAGAGAACAGGTTGAGTTTCTAGCCCCTATCATTGAGCAAAGAAGGAGGGCTATCCAAAACCCTGGCTCAGACCACACAGCCACAACATTCTCCTACCTGGACACACTCTTTGACCTCAAAGTTGAAGGAAAAAAATCAGCACCTTCTGATGCTGAATTGGTCTCCCTATGCTCAGAGTTTCTCAATGGTGGAACCGACACAACAGCAACCGCGGTTGAGTGGGGGATTGCACAGCTCATAGACAACCCTCACATTCAGAAAAAGCTGTATGAAGAAATCAAGAGGACAGTGGGAGAGAAGAAAGTGGATGAAAAGGACGTTGAGAAAATGCCTTACCTGCATGCTGTGGTGAAGGAGCTTTTGAGGAAGCACCCTCCAACACACTTTGTGCTCACACATGCTGTGACTGAGCCTACCAGTTTGGGAGGGTATGACATACCAGTTGATGCAAATGTTGAGGTGTACACTCCAGCAATTGGTGAGGATCCAAAGTATTGGTCCAACCCTGAGAAGTTTGACCCTGACAGGTTCATCTCTGGGGGAGAGGAAGCAGACATAACTGGGGTGAGAGGAGTGAAGATGATTCCATTTGGAGTTGGGAGAAGGATTTGCCCTGGCTTGGCTATGGCCACAGTGCACATTCACCTCATGATGGCTAGGATGGTGCAGGAGTTTGAGTGGGGTGCTTACCCTCCAGACAAGAAGCTTGATTTCACTGGCAAGTGGGAATTTACTGTGGTCATGAAGGAGTCTCTTAGAGCAACCATCAAGCCAAGAGGAGAGAAACTGCTATAA 1536 0.4811 MATLTSNDHLIFTALAIFISALIFFLTQKTKSKKCNLPPGPPGWPIVGNLFQVARSGKPFFEFVNDVRLKYGSIFTLKMGTRTMIILTDAKLVHEAMIQKGATYATRPPENPTRTIFSENKFTVNAALYGPVWKSLRRNMVQNMLSSTRLKEFRSVRDNAMDRLIKRLRDEAEKNNGAVWVLKDARFAVFCILVAMCFGLEMDEETVERIDQVMKNVLITLDPRIDDYLPILSPFFSKQRKRALEVRREQVEFLAPIIEQRRRAIQNPGSDHTATTFSYLDTLFDLKVEGKKSAPSDAELVSLCSEFLNGGTDTTATAVEWGIAQLIDNPHIQKKLYEEIKRTVGEKKVDEKDVEKMPYLHAVVKELLRKHPPTHFVLTHAVTEPTSLGGYDIPVDANVEVYTPAIGEDPKYWSNPEKFDPDRFISGGEEADITGVRGVKMIPFGVGRRICPGLAMATVHIHLMMARMVQEFEWGAYPPDKKLDFTGKWEFTVVMKESLRATIKPRGEKLL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01948 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Cca02g01948 511 Gene3D Cytochrome P450 29 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01948 511 Pfam Cytochrome P450 38 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01948 511 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01948 511 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01948 511 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01948 511 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01948 511 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01948 511 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01948 511 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01948 511 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01948 511 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01948 511 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01948 511 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01948 511 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01948 511 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01948 511 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 506 - -
Cca02g01948 511 SUPERFAMILY Cytochrome P450 38 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca02g01948 511 PANTHER CYTOCHROME P450 77A4 4 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01948 Cca-Chr2 39022103 39024450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01948 28 506 Cytochrome P450 AT3G10570 70.564 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01948 K21995 - gmx:100795510 955.666