Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01943 ATGAAGAAGACGACAGAGGCGCAACTTGACGGCGTAAGAAAGCAACAACAAACACACAACGCAGTGACGAGAGAAAACAACGACGAAAACAAAAGCAAACGTTTTGTCGAGAGAACACGACAACAAGAGATGCAACGCGACAGCGAAAGAAATGCACAACACGAAGGCGCGACACGGAGGCGCAAAGCGGAGAGACGTGTGGTATTTGATGCACTACATAGGTGTACAAAGCCATCAAGACTATGGGATCTTTATGCTTTTGCAGCAGGACCTTCTAGGTTTCAGAACACTTCTCCACTGGTTCGCTTATTGGATGAATATTTTCGGCTTCTTTGCCTAGATTCTTATCGTGCATCAATCGATATAATTGAAAATGGGTCCTTCACCTTGTCAAATGACCTATGGAGAATAAGTGGCGTGAATGCCAATTATGCAATGTGCCAGAGTTATCCATTTGCTTTGGTCGTTCCAAAAATCATTAGTGACGATGAAGTGCTCCAGGCTTGCAGCTTCCGGGCAAGATGTCGACTACCTGTAGTTTCATGGTGTCATCCTTTGACTGGAGCAGTTGTTGCACGATCTTCTCAACCCTTAGTTGGTCTTATGATGAATATGAGGAGCAATCTGGATGAAAAACTTGTGGCTGCCCTTTGCAGCAAACTAGAGAATGGCTCGAGAAGGTAA 684 0.4488 MKKTTEAQLDGVRKQQQTHNAVTRENNDENKSKRFVERTRQQEMQRDSERNAQHEGATRRRKAERRVVFDALHRCTKPSRLWDLYAFAAGPSRFQNTSPLVRLLDEYFRLLCLDSYRASIDIIENGSFTLSNDLWRISGVNANYAMCQSYPFALVVPKIISDDEVLQACSFRARCRLPVVSWCHPLTGAVVARSSQPLVGLMMNMRSNLDEKLVAALCSKLENGSRR 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01943 227 ProSiteProfiles Myotubularin phosphatase domain. 112 227 IPR010569 -
Cca02g01943 227 MobiDBLite consensus disorder prediction 24 61 - -
Cca02g01943 227 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 59 223 - -
Cca02g01943 227 PANTHER MYOTUBULARIN-RELATED 59 223 IPR030564 -
Cca02g01943 227 Pfam Myotubularin-like phosphatase domain 85 220 IPR010569 -
Cca02g01943 227 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 124 220 IPR029021 -
Cca02g01943 227 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01943 Cca-Chr2 38917741 38919675 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01943 59 227 Protein tyrosine phosphatase (PTP) family AT3G10550 69.591 2.44e-80 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01943 K18081 - ccaj:109789435 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01943 02 38917741 38919675 Cca02g01943 02 38917741 38919675 ECH