Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca02g01928 | ATGATATCTACTAGCAAGCTTTCTGATTTCTATGTGCAGAAAGGTCGTCTATCAGAGGACGAGGCACGATTCTATGCAGCTGAAGTTGTAGATGCTCTTGAATACATACACAATTTGGGAGTGATACATCGCGATATTAAGCCAGAGAATTTATTACTTACAGCTGAAGGACATATTAAAATAGCCGATTTTGGGAGTGTGAAGCCTATGCAGGATAGCCAAATCACTGTCCTTCCAAATGCAGCATCAGATGACAAAGCCTGCACTTTTGTGGGAACAGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCCTCTCCAGCAACTTTTGGAAATGACCTTTGGGCACTTGGCTGCACATTATACCAAATGCTTTCTGGAACTTCCCCTTTTAAAGACGCAAGTGAATGGCTTATTTTTCAAAGAATTATAGCAAGAGAACTTAGATTTCCAGATTACTTTTCTGATGAAGCAAGAGACCTTGTTGACCGCCTGTTGGATTTGGACCCCAGCAGGAGACCAGGTGCAGGACCTGATGGTTATGCTATTTTGAAGATGCACCCTTTTTTCAAGGGGGTTGACTGGGATAACTTGAGGGCACAGATTCCTCCAAAACTTGCTCTAGAACCTTGTACTCAGTCGCCTGCTGGTGATGATGTTCATGACTCATCATGGAGTCCCTCTCACATTGGAGATGGTTCTGCTTCTTTGGCTAGACAACCTGATGGTGCCGCATCATCTTCTGAAGGAACTGGTCACATAACTAGGCTAGCTTCAATTGATTCCTTCGATTCAAAATGGCAACAATTTTTGGATCCTGGGGAATCTGTTCTTATGATCTCTATGGTGAAGAAATTACAAAAACTAACAAGCAAGAAGGTGCAGCTCATCCTCACCAACAAACCAAAGTTGATCTATGTGGACCCGTCAAAGTTAATTGTGAAGGGAAATATAATATGGTCTGATAATCCAAATGATTTAAGCATCCAAGTGACTACTCCATCAAATTTCAAGATTTGCACACCTAAAAAGGTAATGTCGTTTGAGGATGCAAAGCAAAGAGCATGGCAGTGGAAAAAGGCAATTGAAGGACTTCAAAACCGGTGA | 1104 | 0.4203 | MISTSKLSDFYVQKGRLSEDEARFYAAEVVDALEYIHNLGVIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARELRFPDYFSDEARDLVDRLLDLDPSRRPGAGPDGYAILKMHPFFKGVDWDNLRAQIPPKLALEPCTQSPAGDDVHDSSWSPSHIGDGSASLARQPDGAASSSEGTGHITRLASIDSFDSKWQQFLDPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSIQVTTPSNFKICTPKKVMSFEDAKQRAWQWKKAIEGLQNR | 367 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca02g01928 | 367 | ProSiteProfiles | Protein kinase domain profile. | 1 | 189 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca02g01928 | 367 | MobiDBLite | consensus disorder prediction | 208 | 250 | - | - | |
Cca02g01928 | 367 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 240 | IPR011009 | - | |
Cca02g01928 | 367 | Gene3D | - | 243 | 367 | IPR011993 | - | |
Cca02g01928 | 367 | Gene3D | Transferase(Phosphotransferase) domain 1 | 6 | 204 | - | - | |
Cca02g01928 | 367 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 6 | 363 | - | - | |
Cca02g01928 | 367 | PANTHER | 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 | 6 | 363 | - | - | |
Cca02g01928 | 367 | Pfam | Protein kinase domain | 4 | 175 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca02g01928 | 367 | MobiDBLite | consensus disorder prediction | 216 | 232 | - | - | |
Cca02g01928 | 367 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 41 | 53 | IPR008271 | GO:0004672|GO:0006468 | |
Cca02g01928 | 367 | SMART | serkin_6 | 1 | 189 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca02g01928 | 367 | Pfam | PH domain | 264 | 366 | IPR033931 | - | |
Cca02g01928 | 367 | Coils | Coil | 347 | 367 | - | - | |
Cca02g01928 | 367 | SUPERFAMILY | PH domain-like | 183 | 366 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca02g01928 | Cca-Chr2 | 38674438 | 38679564 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca02g01928 | 6 | 367 | AGC Kinase Gene Family | AT3G10540 | 80.110 | 0.0 | 601 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_PDK1 | Cca02g01928 | Pkinase | 3.3e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca02g01928 | K06276 | - | gmx:100788780 | 672.93 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca02g01928 | 02 | 38674438 | 38679564 | Cca02g01928 | 02 | 38674438 | 38679564 | ECH |