Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01891 aTGGGGATTGCAGTGGCGAGTGTTGATTTGCTGAGTGAAAAGGCAGCGTTGATGAGAGAGTCTCTGCAGAAGAGCCAAACCATCGCAGACAACGTCGTCACCATTCTGGGTTCCTTCGACCACCGTCTCTCCGCCCTAGAAACCGCCATGCGTCCCACTCAGATTAGAACTCACTCCATAAGGAAGGCTCATGAGAATATTGATAGGACTCTGAAGGCTGCGGAGGTTATATTGGCTCACTTTGATCAATATCGTCAGGCAGAGGCAAAAATACTTAAAGGGCCACATGAAGACCTGGAAAACTATCTTGAAGCAATTGATAAGTTGAGAAGCAATATTCAGTTTTTTGGCAGCAAGAAGGGTTTTAAGAGCAGTGACGGTATTGTCATCCACGCTAATAATTTGCTAGCTAAGGCTATTTCGAAGCTAGAAGATGAGTTTAAGCAGTTATTATCATCTTACAGCAAACCTGTGGAACCTGAGCGCCTCTTTGATTGCCTTCCAAATTCAATGCGACCTTCATCAGGATCACCTGGCCATGAGGGTGACCCTAGTGGCAAGAATCCTAATCACCATTCTGAGCATCACAACAATAATGGTGATGCTGTTGTATACACACCTCCCGCTCTTATACCACCAAGATTTTTGCCACTGCTACATGATTTAGCACAGCAAATGGTTGAAGCTGGTCACCAGCAGCAGCTACTCAAAATATACAGAGATGCCCGTTCAAATGTATTGGAAGAGAGCCTCCAAAAGCTTGGAGTTGAGAAACTCAACAAAGATGATGTTCAAAAGCTGCAATGGGAGATTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATAGCAGTGAAATTGTTGTTTGCTGGTGAGAGAAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTTAGTGAACAGTGTTTTGCCGAGGTGACTACAAACAGTGTCTCAATGCTACTCAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCTCCAGAAAAGTTATTTGTACTATTGGACATGTATGAAATAATGCAAGAGCTTCACTCAGAGATTGAAACTCTTTTTAAAGGCAAAGCTTGCTCTGGAATAAAAGAAGCTGCTACTAGTTTGACAAAACGACTTGCACAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAGGCAGTCGAGAAAGATGCTACAAAGACTGCAGTAACAGATGGAACTGTCCATCCTTTGACGAGCTATGTGATTAACTATGTGAAGTTTTTATTTGACTACCAATCCACCTTGAAGCAACTTTTTCAGGAATTTGAAAGTGGTGATGATTCTTCACAGCTAGCATCTGTAACAGTGCGGATAATGCAAGCTTTGCAAACCAATTTAGATGGAAAATCAAAGCAGTATAAAGACCCTGCATTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCAGTTCGGAGGTCTGAAGCCAAGGATTTGCTAGGGGATGATTGGGTACAACGACATAGGAGGATTGTTCAACAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTGCCTATCTATTCAGGGGCTTACCTCATCAGGTGGTGGGAGTGGTACTGGTGGCGATGGCGGAGCCGGAAGCAGTAGTGGTGCTTCAAGAGCAATTGTTAAAGACAGGTTTAAGAATTTCAATGTTATGTTTGAGGAACTCCATCAGAAACAATCTCAGTGGACAGTTCCTGACACCGAGTTGCGAGAGTCTCTTAGGCTTGCAGTTGCTGAAGTCTTGTTGCCAGCCTATAGATCATTTGTCAAACGTTTTGGGCCCCTAGTGGAGAGTGGAAAGAATCCTCAAAAGTACATCAAATACACACCAGAAGATCTAGACCGAATGTTGGGTGAATTTTTTGAAGGAAAAAACATGAGTGAAACAAAGCGATAA 1956 0.4233 MGIAVASVDLLSEKAALMRESLQKSQTIADNVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDRTLKAAEVILAHFDQYRQAEAKILKGPHEDLENYLEAIDKLRSNIQFFGSKKGFKSSDGIVIHANNLLAKAISKLEDEFKQLLSSYSKPVEPERLFDCLPNSMRPSSGSPGHEGDPSGKNPNHHSEHHNNNGDAVVYTPPALIPPRFLPLLHDLAQQMVEAGHQQQLLKIYRDARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGKACSGIKEAATSLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFESGDDSSQLASVTVRIMQALQTNLDGKSKQYKDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSGTGGDGGAGSSSGASRAIVKDRFKNFNVMFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKNPQKYIKYTPEDLDRMLGEFFEGKNMSETKR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01891 651 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 647 - -
Cca02g01891 651 Pfam Exo70 exocyst complex subunit 278 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca02g01891 651 Gene3D Exocyst complex component Exo70 75 181 - -
Cca02g01891 651 Gene3D Exocyst complex component Exo70 185 651 - -
Cca02g01891 651 SUPERFAMILY Cullin repeat-like 77 642 IPR016159 -
Cca02g01891 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 647 IPR004140 GO:0000145|GO:0006887
Cca02g01891 651 MobiDBLite consensus disorder prediction 164 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01891 Cca-Chr2 38239730 38248091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01891 3 651 EXO70 exocyst subunit family AT5G03540 75.923 0.0 1003
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01891 K07195 - gmx:100813987 1181.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01891 02 38239730 38248091 Cca02g01891 02 38239730 38248091 ECH