Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01873 ATGTCAAAAGTTCCTGTAGCTGCTTGTGAAAGAAATTTTAGAGTCAAAGTTGAACCAAAACTTGAAGATGATTTGGAGCCTTTACATGCTACACAAGTTCAAGCAAAGCTTGAAGATGATATGAAACCTTTGAATGTTGCACAAGTTCAACCAAAACTTGAAGATGATGTGAAGCCTTTACATGTTGCACAAGTTCAACCAAAACATGGAGATGATTGGAAGCGAAGTTTTTCAGTTTATTCCAAGCCTTTTGAGTTCTACAAGGTTCTAATGACAGTTTTGCTAAGGGACGGCCTAACTAGGTCTTTGCTACCTTTGTTTATCTGTCTGGCAAGGTTGGATCCAAATATTGGAGCCGAAGGGGCAAAAAAGTATCACGTTCTTCGGATATTCACATTTCATGGTCCCTATGCAATTGAGGGGAAGGCTCAAGTCCAATTTATGCTTCCTGAACGTCATAAGTTAACTGTGGAAGCTAAGTCTGGCAAATATTTTATCTTGATTTTCGCCTCTGCAGCGGAATCCCCAATTTCATTATCTACTAGAGTTGATGCAAACCTGACGCCTTGGGAGGTGGCTTCTAATGAATCTAGGGGTGGAGAAAACTGCTTATATGGAAAAGTACCTTTGGCACAAATTTATCATGCTTGGGATGTGTTTCCGGAATTTGCACCCGAAATTGAGTTTCTAACTGCTGAAAATTGGGTTCCATGTATTTTGACGTACTGTTTTCAAAAAAAGAGCAAGAGCATATCAATTCAAGATTCCAAGGATAAGGATTCGGAGGAATTTCCATCTGTTTATGTGTCTCTGAAGACCAATATCTGGAGAGATGAGGTCAGAACAGTTTCACCTCAATTTTTGTAA 867 0.3933 MSKVPVAACERNFRVKVEPKLEDDLEPLHATQVQAKLEDDMKPLNVAQVQPKLEDDVKPLHVAQVQPKHGDDWKRSFSVYSKPFEFYKVLMTVLLRDGLTRSLLPLFICLARLDPNIGAEGAKKYHVLRIFTFHGPYAIEGKAQVQFMLPERHKLTVEAKSGKYFILIFASAAESPISLSTRVDANLTPWEVASNESRGGENCLYGKVPLAQIYHAWDVFPEFAPEIEFLTAENWVPCILTYCFQKKSKSISIQDSKDKDSEEFPSVYVSLKTNIWRDEVRTVSPQFL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01873 288 PANTHER POLYCOMB GROUP PROTEIN 89 255 - -
Cca02g01873 288 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 89 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01873 Cca-Chr2 38069364 38076377 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01873 88 254 C2H2 Transcription Factor Family AT5G51230 29.609 2.15e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01873 - - ccaj:109804991 140.969