Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01871 ATGGAACTTGAAGAAGTGATACTAGATGATGACAGTGAGGATGAAATTAATGAGGACGCTCAAGAGATTCAAGATCGAAGGAAAGTATCTCTTCTTGATGCGACCAACGATGAGAAGCAGTTCATACCTATGTGGAATGCATTTGTTAAGAAACATAGGGTGCTGGCAGAGGGTCACATTAATTGGGCATTTGAAGCTTTCACAAAATATCATTGCGCTGATATTGCTCAGTCCCCCGCATTAACCTGGCGTTGGAAAGCGTTTATGATCAAACTATCGAATCATGGTCTTCTAAAGGCACGGACCCTTATTACATGCAATATTCTTCTTGAACAATACCGCAAGCTGAATTCAGATATATCCCAACAGCTAAAGAAATTTCAGTTTTAA 390 0.3974 MELEEVILDDDSEDEINEDAQEIQDRRKVSLLDATNDEKQFIPMWNAFVKKHRVLAEGHINWAFEAFTKYHCADIAQSPALTWRWKAFMIKLSNHGLLKARTLITCNILLEQYRKLNSDISQQLKKFQF 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01871 129 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 1 120 - -
Cca02g01871 129 PANTHER POLYCOMB GROUP PROTEIN 1 120 - -
Cca02g01871 129 Pfam VEFS-Box of polycomb protein 1 107 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01871 Cca-Chr2 38052731 38054573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01871 1 112 C2H2 Transcription Factor Family AT5G51230 53.097 1.75e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01871 - - ccaj:109804962 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01871 02 38052731 38054573 Cca02g01871 02 38052731 38054573 ECH