Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca02g01870 | ATGGCTGTGCACAAAAATCTAAAGCTCCATAAACTATATTTTGTGATCCTAATAGCAGCAGCAAAAGCATCATCTCAACCCACTTCAAATTGCCCCCAAAGCTGTGGAAATCTCAACATTCCCTACCCTTTTGGGACACGTGAGGGTTGTTACTTGAACCACACTTTCCTCATCACATGCAACCATAGCAACTCCACCACACCCACCCCTTTATTGGGAAGTGACAACATAGTGGTGCTCAACATATCACTAAATGAAGGAGAAATTCTAGTTTCAAGCCCCGTAATCCATGATTGCTATGGCAATTATTCTAAGGAGGAAAATGGTTTCAATTTGACCCATTTTTCAATCTCACCTAGTAAGAACAAATTCACCACACTTGGGTGTGAAACGGTGGGAATATTCATGGGTTATGATAGCAACAAGAAACATGTTACAACCACGGGATGTGTATCCACATGTGGCACACTAGATGACATCACAAGTAATATTGGATCATGTGGTGGCATTGGTTGTTGCCAAATTAGTGTTCCCAATGGATTATATGGTTTTGCAATGCAAAGTTGGAGTATGGATAACCACTCCACGGTACGTGAATTCAATCCATGCAACTATGCGTTCATAGTTGAGGAAGGGTATTACAAATTTGAGACAACAAATCTTAAGAATCTCGAGAATAAGAGGTTGCCCATGGTGCTTGATTGGGCTGTGGAAAATCACACGTGCCAAGAGGCACAAGATCTTAGTAGCTATGCATGCAAGGGCAAGAACAGTGTTTGCCTCGATTCATCAATTGGTTATCGTTGCAAATGTCGTCATGGTTTCGAGGGAAACCCTTACATTCGTGATGGCTGCCAAGATATCGATGAATGTGCTACGAACACTAATCCATGCATCATCAGAAAAAGATGCCAAAACCTTGATGGCAGTTTCAAGTGCTCATGTCCAAAGGGACACGAAGGAGATGGATTGACAAATGGCGAAGGCTGCCGACCCAAAAATGACAAACCCATAGGGAATCTAATACTTATAATTGGACTGAGTTTGAGCTTAAGTCTATTGGCAGTGGTTGTGGGATGCCTAAACATATACCCCCAAATCCGTGAAAGAAAGCTCATCAAAATGAGAGAAAACTATTTTCAAAAAAATGGTGGTATGTTACTGCAAGAACAGATTGATTCACACCATGGCTCAACTGAAAGAGCCACAATCTTCACTGTTGAGGAGCTCAAGAAAGCCACCAACAACTATGATGAGGATAGAATCATAGGCAAAGGAGGCCATGGAACAGTGTACAAAGGTACATTATCAAATGGCAGGGTTGTTGCCATCAAGAAGTCCATGGTTTCTAACCAAAGTGAGATTGAGCAATTCATCAACGAAGTGGTTGTGCTTACCCAAATCAACCACAGGAATGTTGTCAGACTACTAGGTTGTTGTTTAGAGACAGAATTTCCCTTACTTGTTTATGAGTTCATCACTAATGGTACCCTTTGTGAGCATCTACATTTTGAGGGTCAAGCATGTAACAGTAATAATCACAAACTTTCATGGACAACACGTTTGAGAATTGCAGCAGAGACAGCAGAAGCTCTTGCATACTTGCATTCAGCTGCTTCTACACCAATCATACATAGAGATGTTAAAACTGCAAATATTCTTCTTGATGAGAATCTCACAGCCAAGGTTTCTGACTTTGGGGCTTCAAAGTTTGTTCCTCTTGATAAAACTCAGTTAACCACTTTGGTGCAAGGAACATTGGGTTACCTTGACCCGGAGTACTTCCAAACAAGTCAACTAACTGATAAGAGTGATGTGTATAGCTTTGGTGTTGTCCTTGCAGAACTATTGACAAGTAAGAAGGCACTTTCATTTATTAGGCCTGAGATCTATAGAAACTTGTCTATGTATTTTGTTTCTACAATGAATGAGGGTCGCTTGGATCAAATATTGGACAATGAAATTGTGAGTGATGCAAGTGTTGGGTATATAATAGAAGTGGCTAATCTTGCCAAGAGGTGTCTTAGGCTAAAGGGAGAAGAAAGACCAAGCATGAAAGAAGTGGCAATGGAGTTGGAGGGAATAAGGGTCATGGAAAAGCATTCTTTAGGAGGAACAAATGATGTTATATCTGAAGAAGAGAGAGAGTACTTTCTCAAACCACGTTCGCCCATTAACATTGTTGATCATGGTGACGGTACTAGTGGTAGCAGCACAATTTCTAGGTTCTATAATTTACATAACCAGATTTTGGAACCACTAGAGGATGGACGATAG | 2277 | 0.4084 | MAVHKNLKLHKLYFVILIAAAKASSQPTSNCPQSCGNLNIPYPFGTREGCYLNHTFLITCNHSNSTTPTPLLGSDNIVVLNISLNEGEILVSSPVIHDCYGNYSKEENGFNLTHFSISPSKNKFTTLGCETVGIFMGYDSNKKHVTTTGCVSTCGTLDDITSNIGSCGGIGCCQISVPNGLYGFAMQSWSMDNHSTVREFNPCNYAFIVEEGYYKFETTNLKNLENKRLPMVLDWAVENHTCQEAQDLSSYACKGKNSVCLDSSIGYRCKCRHGFEGNPYIRDGCQDIDECATNTNPCIIRKRCQNLDGSFKCSCPKGHEGDGLTNGEGCRPKNDKPIGNLILIIGLSLSLSLLAVVVGCLNIYPQIRERKLIKMRENYFQKNGGMLLQEQIDSHHGSTERATIFTVEELKKATNNYDEDRIIGKGGHGTVYKGTLSNGRVVAIKKSMVSNQSEIEQFINEVVVLTQINHRNVVRLLGCCLETEFPLLVYEFITNGTLCEHLHFEGQACNSNNHKLSWTTRLRIAAETAEALAYLHSAASTPIIHRDVKTANILLDENLTAKVSDFGASKFVPLDKTQLTTLVQGTLGYLDPEYFQTSQLTDKSDVYSFGVVLAELLTSKKALSFIRPEIYRNLSMYFVSTMNEGRLDQILDNEIVSDASVGYIIEVANLAKRCLRLKGEERPSMKEVAMELEGIRVMEKHSLGGTNDVISEEEREYFLKPRSPINIVDHGDGTSGSSTISRFYNLHNQILEPLEDGR | 758 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca02g01870 | 758 | Pfam | Wall-associated kinase | 166 | 272 | IPR013695 | GO:0004674|GO:0016021 | |
Cca02g01870 | 758 | Gene3D | Transferase(Phosphotransferase) domain 1 | 493 | 713 | - | - | |
Cca02g01870 | 758 | SUPERFAMILY | EGF/Laminin | 286 | 322 | - | - | |
Cca02g01870 | 758 | Pfam | Protein kinase domain | 417 | 688 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca02g01870 | 758 | Gene3D | Phosphorylase Kinase; domain 1 | 382 | 492 | - | - | |
Cca02g01870 | 758 | SMART | egfca_6 | 287 | 331 | IPR001881 | GO:0005509 | |
Cca02g01870 | 758 | SMART | egfca_6 | 242 | 286 | IPR001881 | GO:0005509 | |
Cca02g01870 | 758 | SMART | serkin_6 | 417 | 695 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca02g01870 | 758 | ProSitePatterns | Calcium-binding EGF-like domain signature. | 287 | 313 | IPR018097 | GO:0005509 | |
Cca02g01870 | 758 | SMART | egf_5 | 241 | 286 | IPR000742 | - | |
Cca02g01870 | 758 | SMART | egf_5 | 290 | 331 | IPR000742 | - | |
Cca02g01870 | 758 | SUPERFAMILY | Protein kinase-like (PK-like) | 400 | 693 | IPR011009 | - | |
Cca02g01870 | 758 | CDD | STKc_IRAK | 423 | 695 | - | - | |
Cca02g01870 | 758 | ProSitePatterns | Protein kinases ATP-binding region signature. | 423 | 446 | IPR017441 | GO:0005524 | |
Cca02g01870 | 758 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 543 | 555 | IPR008271 | GO:0004672|GO:0006468 | |
Cca02g01870 | 758 | Pfam | Calcium-binding EGF domain | 287 | 323 | IPR001881 | GO:0005509 | |
Cca02g01870 | 758 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 15 | 705 | IPR045274 | GO:0007166 | |
Cca02g01870 | 758 | ProSiteProfiles | Protein kinase domain profile. | 417 | 704 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca02g01870 | 758 | ProSiteProfiles | EGF-like domain profile. | 287 | 325 | IPR000742 | - | |
Cca02g01870 | 758 | Pfam | Wall-associated receptor kinase galacturonan-binding | 31 | 91 | IPR025287 | GO:0030247 | |
Cca02g01870 | 758 | Gene3D | Laminin | 238 | 330 | - | - | |
Cca02g01870 | 758 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 | 15 | 705 | - | - | |
Cca02g01870 | 758 | ProSitePatterns | Aspartic acid and asparagine hydroxylation site. | 304 | 315 | IPR000152 | - | |
Cca02g01870 | 758 | CDD | EGF_CA | 287 | 322 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca02g01870 | Cca-Chr2 | 38052196 | 38059265 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca02g01870 | 7 | 697 | Receptor kinase-like Gene Family | AT1G21230 | 46.110 | 0.0 | 584 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Cca02g01870 | Pkinase | 6.4e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca02g01870 | - | - | vun:114190859 | 1154.04 |