Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01868 ATGCCTGAGACTTCTTCAGCAAGAATGCCAGATGCTCCTGTTGCAGATTCTGAAAAAGGCAAAGGTATAGTAAATCATCAACATGATTGGGAGCATTTATCTGCAGAAGAGAAGCATGCTGCAGAAGAGAGTTTTGCAGTTTATTGCAAGCCTGTAGAGTTCTACAACTTTCTTCAGCATCGTGCTAACCAATACCCATTATTTCTTCAGAGATGTTTAGACTACATGATAAAGGCTAAGCGCAAGAAGAGGATACCATTGACAGTTTCCTTGTCATGGAATGGTGATGAAACTCAATCTCTGTTTCCTTTATGCATCTGTCTGGCAAGGCTGGATCGAAATGATGAAGCTAAAGAAGGGGCCAAAAAGTATCAGGCTATTCGGATATCCACAATTCACAGTTCGTCTAAAACTGATGGGAATGGGAATACTGAAGTCCAAGCTAACTTTGTGCTTCCTGAACTTGAGAAGTTACATGAGGAAGCTAAATCTAGCAAATTTTATGTCTTCATTTTTGCCTCTGTGGAAAATCCAATTTCATTATCTGAAGTCAATGCCAGCATGAGGCCTTGGGACGTGGCTTCTAATGAATGTGGAGAGATATGCTTATATGGAAAAATATCTATGAAAAACCTTCATTGGATTTGGGATATGTATCCAAAGATTCCTGTGGATCAGCTAATCCGGATTCAATGTCGAATTAATTTGCTTCCATGTATTGTAATGTATTGTTTTCAAAGAAAGAGCAAGATTATCTCAGTTCTGGATTCCAGGGATTCTCCAGATGAGAGGGACTTAAAGCAACTTGAAGTCACACTTTCTGTCAGAAAATTAGAAGATACGGAAAAATCTTCTTACGACACTCAAGCAAACAGAGAAGTTGGATCATCGTCATCATTATCTAATATCCATCGGTTGAAACAAGGAAATGTGTCATTTAATTACAGGTATTACAATAATACGTTGCAGAAAGTGGAAGTTACGGAAGATTTCTCTTGTCCATTTTGTTTGGTTAAATGTGCAACATTCAAGGGCTTACGATGCCACCTATCAATGTCGCATGACCATTTTAATTATGAATTTTTGGAATTGGAGGATATTCCATCTGTAAATGTGTCCGTGAAAACCAATATTTGGAAACCTGAGATTATTGGAGATGGAGTTGACCCGAGAATTCAAACTTATATCTTTTGTGCCAAGCGACCTAAGCGCAGAGACCAATCACTCTTAGAATCTGAAATTCTTGCCAGCGATACTGAGCTTTTGGAGAAACATGATGGTTCAAATGCAATTGTGTTGCATACTGGTCCGGATTATGTCCCACCAGTTTCTTATCAAGATCATGGGACAGCTGCAGTGCTACAGGTTGACCAGGAAGGGGTTTCAAATGCAATTGTGTTGCATCCTGGTCTGGATTGTGTCCCACCAGTATCTGATCATGATCATGGGATGCCTGCAGTGCTACAGGTTGACCAGGAAGGGGTTTCAAATGCAATAATTTTACATCCTGGTCCAGATTGTGTCCCACCAATATCTGAGCATGATAATGGGACTCCTGCAGTGCCACAAGTTGACAAGAGAAGCAAGTTAATAGTTGAGCGCCGTGACCCAAAAATGTACGTCCTTAATCTTTTCTCTGTCCTTGGAAAATTAAAACTTTGTACATCCAGGAAAGATATGACATATTTTAATACAAGGATGAGAATTATGTACTATTTGTATCTTTGA 1728 0.3941 MPETSSARMPDAPVADSEKGKGIVNHQHDWEHLSAEEKHAAEESFAVYCKPVEFYNFLQHRANQYPLFLQRCLDYMIKAKRKKRIPLTVSLSWNGDETQSLFPLCICLARLDRNDEAKEGAKKYQAIRISTIHSSSKTDGNGNTEVQANFVLPELEKLHEEAKSSKFYVFIFASVENPISLSEVNASMRPWDVASNECGEICLYGKISMKNLHWIWDMYPKIPVDQLIRIQCRINLLPCIVMYCFQRKSKIISVLDSRDSPDERDLKQLEVTLSVRKLEDTEKSSYDTQANREVGSSSSLSNIHRLKQGNVSFNYRYYNNTLQKVEVTEDFSCPFCLVKCATFKGLRCHLSMSHDHFNYEFLELEDIPSVNVSVKTNIWKPEIIGDGVDPRIQTYIFCAKRPKRRDQSLLESEILASDTELLEKHDGSNAIVLHTGPDYVPPVSYQDHGTAAVLQVDQEGVSNAIVLHPGLDCVPPVSDHDHGMPAVLQVDQEGVSNAIILHPGPDCVPPISEHDNGTPAVPQVDKRSKLIVERRDPKMYVLNLFSVLGKLKLCTSRKDMTYFNTRMRIMYYLYL 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01868 575 MobiDBLite consensus disorder prediction 1 20 - -
Cca02g01868 575 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 26 540 - -
Cca02g01868 575 PANTHER POLYCOMB GROUP PROTEIN 26 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01868 Cca-Chr2 38026239 38044303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01868 45 470 C2H2 Transcription Factor Family AT5G51230 38.889 1.26e-83 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01868 - - ccaj:109804991 1104.74