Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01863 ATGGAAGATGTGAAGGTGTTTGGACTATGGGCAAGTCCATTTACCCAAAGGGTTGTTTGGGCACTGAAATTGAAGGGTGTGAGTTATGAATACATTGGTGAAGATCTTGCTAACAAGAGCAACCTCTTATTGCAACACAATCCAATCTACAAGAAGGTTCCAGTTCTTGTGCATAATGGAAGAGCAATAGCAGAGTCAATGATAATTCTTGAATACATTGATGAGACATGGCCTCAGACACCTCTATTGCCTCAAGATGTTTACCATCGATCTAATGTTCGTTTCTGGTCAAAATTCATCGACCAAAAGACAGTAGACATGATGAAGTTTTTTGGGTATGATGGAGAAGTACAAGAGAGAGCAATGAAAGAGACTTTGGAAACTTTGAGAGTGATAGAAAAGGAAAGTGGGCTTGCTGAAAACAAATTCATGGGTGGCAACACAATTGGACTGGCAGACCTTGCCTTGGGTTGGGTTGCACATACTTTGGTTGCCATGGGATATGTGATTGGAGTCAAGTTCATCACACCTCATGCCTTTCCTAACCTTCACTCTTGGATGGCCAATTTCTTGCAAATTCCTCTTATAAAACACAATCTCCCACCTCACCACCTAGCAATTCAGTACTTCACACAAAAGAGGGAGATGTTTCTTGCTATGATTAAACAAGAAGTTACtcatcattatcaccatcatcatcacaatcaccaccatcatTAA 720 0.3847 MEDVKVFGLWASPFTQRVVWALKLKGVSYEYIGEDLANKSNLLLQHNPIYKKVPVLVHNGRAIAESMIILEYIDETWPQTPLLPQDVYHRSNVRFWSKFIDQKTVDMMKFFGYDGEVQERAMKETLETLRVIEKESGLAENKFMGGNTIGLADLALGWVAHTLVAMGYVIGVKFITPHAFPNLHSWMANFLQIPLIKHNLPPHHLAIQYFTQKREMFLAMIKQEVTHHYHHHHHNHHHH 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01863 239 CDD GST_N_Tau 4 77 - -
Cca02g01863 239 SFLD Main (cytGST) 1 220 - -
Cca02g01863 239 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Cca02g01863 239 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Cca02g01863 239 CDD GST_C_Tau 88 212 IPR045074 GO:0004364|GO:0006749
Cca02g01863 239 Gene3D - 86 221 - -
Cca02g01863 239 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 217 IPR010987 -
Cca02g01863 239 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 205 IPR045073 -
Cca02g01863 239 PANTHER GLUTATHIONE S-TRANSFERASE, C-TERMINAL, THIOREDOXIN-LIKE FOLD 8 205 - -
Cca02g01863 239 SUPERFAMILY Thioredoxin-like 3 103 IPR036249 -
Cca02g01863 239 Gene3D Glutaredoxin 1 85 - -
Cca02g01863 239 SUPERFAMILY GST C-terminal domain-like 75 217 IPR036282 -
Cca02g01863 239 SFLD Main.3: Omega- and Tau-like 1 220 IPR045073 -
Cca02g01863 239 Pfam Glutathione S-transferase, C-terminal domain 119 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01863 Cca-Chr2 37991916 37995008 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01863 2 215 Glutathione S-transferase Gene Family AT2G29420 45.116 3.04e-66 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01863 K00799 - tcc:18602840 270.396