Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01859 ATGACAGAGGTGAAGTTACATGGATTTTGGTATAGTCCTTTCACTTTGAAAGTGAAATGGACTCTTGAGTTAAAAGGTATTCCTTATGAGAATATAGAAGAAGATCGTTTCAACATGAGTGTTCAAATTTTCCAATACAATCCTATATATAAGAGGACTCCAATTCTTGTTCACGATGGAAAACCCTTGTGTGAGTCCACAATCATTGTTGAATACATTGATCAGATATGGCCAGAAAATCCATTGTTTCCTATTGATTCTTATGAGAGAGCTTTGGCTCGATTTTGGATTAAATACGCTGATGACATGGTTTCTGCAATTAGGTTACTTGCCCTTAGCAGCAACAGTGAAGAGCAAGTGAAGGCCATAGAGAAGATATGGGAGCATCTCAGAGTGGTTGAGGATCGATGCTTCAATGATCATGAGAAGAAATTTTTTGGAGGTGACACTATTAACATTGTGGACATAGCATTTGGGTCCATGGTCAAATTTATTACAGTTCTAGAAGATGCTCTTGAAGTGAAGATACTAGAATATGAGAAATTCCCTCACTTTCATTTATGGTATAATAATTTCAAGAATGTTCCAATCATTAAAGAAAACCTCCCAGATCAAGATAAAATGCTGGCTTTTCTTAAATTTTCCAGAGAAAAGCTTTTGGGATCTTCTTAA 672 0.3586 MTEVKLHGFWYSPFTLKVKWTLELKGIPYENIEEDRFNMSVQIFQYNPIYKRTPILVHDGKPLCESTIIVEYIDQIWPENPLFPIDSYERALARFWIKYADDMVSAIRLLALSSNSEEQVKAIEKIWEHLRVVEDRCFNDHEKKFFGGDTINIVDIAFGSMVKFITVLEDALEVKILEYEKFPHFHLWYNNFKNVPIIKENLPDQDKMLAFLKFSREKLLGSS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01859 223 CDD GST_N_Tau 4 77 - -
Cca02g01859 223 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Cca02g01859 223 SFLD Main.3: Omega- and Tau-like 1 220 IPR045073 -
Cca02g01859 223 SUPERFAMILY Thioredoxin-like 4 103 IPR036249 -
Cca02g01859 223 CDD GST_C_Tau 88 214 IPR045074 GO:0004364|GO:0006749
Cca02g01859 223 Gene3D Glutaredoxin 1 85 - -
Cca02g01859 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 211 IPR010987 -
Cca02g01859 223 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 217 - -
Cca02g01859 223 SUPERFAMILY GST C-terminal domain-like 76 218 IPR036282 -
Cca02g01859 223 Pfam Glutathione S-transferase, C-terminal domain 123 200 IPR004046 -
Cca02g01859 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 217 IPR045073 -
Cca02g01859 223 Gene3D - 86 223 - -
Cca02g01859 223 SFLD Main (cytGST) 1 220 - -
Cca02g01859 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01859 Cca-Chr2 37956046 37957043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01859 4 207 Glutathione S-transferase Gene Family AT2G29470 40.291 3.66e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01859 K00799 - gmx:547584 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01859 02 37956046 37957043 Cca02g01859 02 37956046 37957043 ECH