Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01857 ATGACAGAGGTGAAACTACATGGATTCTGGTATAGTCCTATGACTTTGAGAGTGGTATTGACTCTAAAGTTAAAGGATATACCGTATCACAATATAGAAGAAGATCGTTTTAATAAGAGTCTTGAACTTCTTCGATACAACCCGGTGTACAAGAGAACTCCGGTATTTGTTCATAATGGAAGACCTTTATGTGAATCCATGCTTATTATTGAATACATTGATGAAATTTGGCCACATAATTCATTGGTTCCTGCTGATCCCTATGAGAGAGCTCTTGCACGATTTTGGGCTAAATATGCTGATGATTTGTTTTCTGCAGTTGTGGCCTTCTACCTTGGCAATAATGGTGAAGAGAAGGAGGCAAACATAGAGAAGGTATGGGAGCATATCATGGTTGTTGAGAATAAGTGTTTTGGTGATCAAAAGAAATTCTTCGGGGGAGACAATATTAACATGGTGGACTTGGCTTTTGGGCCCATAGTCAAAACTATTTTTACTATAGAAGATATTCTTGAAGTGAAGGTCCTGAAAGATGAGAAATTTCCTCACTTCCTTTCATGGTATAATAATTTTAAGGAAGTTCCGATTATTAAAGAAAACCTCCCAGAGCACGAGAAAATGGTGGCTTGTCTCAAGTTTATTAGAGAAAAACGTTTGGCATCTTCCTAA 669 0.3737 MTEVKLHGFWYSPMTLRVVLTLKLKDIPYHNIEEDRFNKSLELLRYNPVYKRTPVFVHNGRPLCESMLIIEYIDEIWPHNSLVPADPYERALARFWAKYADDLFSAVVAFYLGNNGEEKEANIEKVWEHIMVVENKCFGDQKKFFGGDNINMVDLAFGPIVKTIFTIEDILEVKVLKDEKFPHFLSWYNNFKEVPIIKENLPEHEKMVACLKFIREKRLASS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01857 222 SUPERFAMILY GST C-terminal domain-like 75 217 IPR036282 -
Cca02g01857 222 CDD GST_N_Tau 4 77 - -
Cca02g01857 222 SFLD Main.3: Omega- and Tau-like 1 220 IPR045073 -
Cca02g01857 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 216 IPR045073 -
Cca02g01857 222 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Cca02g01857 222 SFLD Glutathione Transferase (cytosolic) 1 220 IPR040079 -
Cca02g01857 222 Pfam Glutathione S-transferase, C-terminal domain 109 192 IPR004046 -
Cca02g01857 222 Gene3D - 86 222 - -
Cca02g01857 222 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 216 - -
Cca02g01857 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Cca02g01857 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 213 IPR010987 -
Cca02g01857 222 CDD GST_C_Tau 87 214 IPR045074 GO:0004364|GO:0006749
Cca02g01857 222 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Cca02g01857 222 Gene3D Glutaredoxin 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01857 Cca-Chr2 37942039 37942997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01857 3 217 Glutathione S-transferase Gene Family AT2G29420 39.535 5.58e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01857 K00799 - gmx:547584 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01857 02 37942039 37942997 Cca02g01857 02 37942039 37942997 ECH