Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01854 ATGAACAATGAGGGTCCCGGCATTTCAGGCAAGCATTATATAGATGCATTGAGTGTTGGTTTTAGTGACAAAATCTCTTCTGATAATGATGTAGACAATGTATGTCTACAGACGGGTGAAGAGTTTTCGTCCGAGTTCTTACGTGATCGGGTTGCCTTAAGGAGATTTCCTATCATAAGTGATGCAGACCAGCATCTGCCAAAAAGGTTGGATCTTAATATTAAAGATAATAATTATGAGCTGGTTTATGAGGATCTAAAGCAGGTTTTGGGGCTAAGGAGAACAGATTCTGATAATAACTCAGATTTGTCCGATGTTGCTTTAGCCAGAGGATATGCTACTGAAATTGACAACAGGGCTTACCCTAATAATTTGAACAGATACCATCGTGAACTTGGTGGTTTCAGACAAGCTTCCGATACATTTTCCAATCAAGTATCAAGTAAATTTTCTGAGGGAAATGGTTGTGAGCAAGTTAATTCGGGATCAAATACTCCATCTATTTATGTCATTGAGTCTCCTCATTCATGCCGTCCTCATGGATCAGTATTGTCAGATGGTTCTTTCTATAAGAAGATAAAGTTTTTGTGTAGTTTTGGAGGTAGAATACTACCAAGGCCAAATGACGGGAAGCTCAGATATGTGGGTGGAGAGACGCGGATAATTTCAATCAGGAAGAACATCACGTGGGAGGAACTTATGAAGAAGACTGCTGCTATTTGCAGTCAAACTCACGTTATAAAATACCAACTTCCTGGGGAGGATCTTGATGCTCTTATATCTGTTTGTTCAAATGAGGATCTTCATCACATGATCGAGGAGTATGAAGAACTTGAAAGAGCTGGAGGCTCTCAACGATTGAGGATTTTTCTCATACCTTCAAATGAATGTGAGAGTCCAAGTTCTAATGAAGCAAGAGTCAATCAGCCAAGTGATGCAGATTATCATTATGTTGTTGCTGTTAATGGCATGCTGGATCCAAGCCTGCGAAAGAACTCCAATGGGCCAAGTTTGGCATGCCATACTAGCCAGTTTGGAAATACATCTGATTACAACAGTCTACATTTCCATAGAGAATCATCTACATCTACATTTGCTTCAGAGATGAAGGATTGCTCCCCAACCTCTCCAAATTTGGCAGGTATACTCTCAAAACCTGGTCCTCAGTTTTTAACAGCCCTGAAGGTAGCAGGCAAGTCATTCAATCAAATGCCTCATTTATCTCCCATTTTCGAACAGTCCAAAGATCCCAATTTACAGATATTTATAGACAAACCACATAATGCTATTAATGAAAGCATTAATCCCTTTGTCGTGGAAGAAGTTCCACGTGACAAACCTTTGTACGAAGACAACACCAATTATGTTGATCCAGTTGCATACTATAAAAATTTTGCACAAGGGCCTACATGTGTGAATTACCAACCTAATAATCAAAATATAGTGGAGTCTGACCAGATCAGGAAGCCTAATGAGAATCTTCATCTTCACAGACGGATCAAAAGTAATGAGTTAGTCTCTTCTGCAGTATGTAATCTAACTAATATAAATTTTGAGAGACCTTTGGTTACCAATGAAGGTTCGTATCATTTTAACAAGATTCTCTCTCATCATCATGAGTCATCAAGTTTATTCTCAGAGTCTGATTTTGGAGAGGGATCTTGTTACAGAATGTTGCATGCCTGTTCTAATTCGACACTTAAGGAGAATGATGAGAACTATAAAGCTCCCTTGCAATTTCCTCTTGGTGTAAAGAGAGACAACTTGCCATCACCAAAAAATTCAAGTTCTTTAGAAGAATGTTCCTTACAGCCTGGAGAGATAATTGATAGGAAAGAACACTTGTCTAAGTATCAAAATTTTCCCATTTTCGGAAGGACCGATAGTTATAAGAGAGTGTCAGAAATCGCTAAAGAGAGGTTGCAACGTGCAGATAAAAGCAATGATTTCTTTGATGAAAATATTGGAGCTATGTCACAAGACAATGCCATAGATTTAAAACACATACAGTACATCTACTCCCCACATGGTGTTTGCTCATCTTCACCAGATTTACAAAACAGTGAATGCGATGTATCTACTGCATCATTTATCCCTTTAGAATCCCCAAGAAACCCGAGGGGGCAACCACATGGTCTACCATTAGACAGAACTACTTCTGAGTTATCCATGAGGAGCCAAAAATCATCCATTCATCACAGGTATTCTATGTCAGAGACAAAAGACAGTCAATCACTTCTCCCTGGTTCTTTTGAGTTACGACATATTGAATCCCTTACTGACAAAGAATCCACACTACCTATCTCATATATGGACATGGACTTTTCTTCCTTAAGGGAGGTTGTTATCCCTGTTGAAGATCCTGCATACTACCTGCATGAAAAGGGAGAAAACACAGTCACTAAGAATCAGTCTTCAGAATATATCACTGAATTTCGTGTTAACAAGCTAGTGCCAGAATCAGTGACTGTTTTCAAGGGACCAATGGATATTTCTTCAGGTATCCAGTCATCCTTAAAAGTTGTCCCAAATGTAGTTGAAGAGGCTGAAGTTGAACCTACATATCCTGAAAAGAAAGGGATAGAATGTGATAATCCAGAATCTGAAAGTAAGCATGCAAAATCTGATAGTGGAAACTTCAATGAGCTTACTGGTGGTAGAGCAACTTCTGAAACAGAAGCTGAAATCTATGGTTTACAGAATATTGAGAATGATGATCTTGAAGAACTGCATGAGTTAGGATCTGGAACATTTGGAACTGTTTATCACGGAAAGTGGAGGGGAACAGATGTTGCAATTAAAAGGATAAAAAGTAGTTGTTTCTCTGGTAGATTGTCAGAGCAAGACCGGTTGACTAAAGATTTTTGGAGAGAGGCACAGATTCTGTCAACTCTTCACCATCCAAATGTTGTGGCATTTTATGGGGTAGTTCCAGATGGTCCAGGTGGAACATTGGCAACAGTAACAGAATATATGGTGCATGGGTCACTGAGGAATGTTCTCATGAAGAAAGAGAAAGTGCTTGACCGTCGTAAAAGGCTGATGATTGCCATGGATGCAGCCTTTGGGATGGAATATTTGCACTTGAAAAGGATTGTTCATTTTGATTTGAAGTGTGATAATTTACTTGTCAATCTCGGTGATCCCGAACGACCTGTATGTAAGGTTGGAGATTTTGGCCTATCCAGAATTAAACGCAATACACTTGTTTCTGGTGGTGTCAGAGGAACCCTTCCATGGATGGCACCTGAATTACTGGATGGTAACAGTTGTAGGGTATCTGAGAAGGTTGATATTTTCTCATTTGGCATTGCAATGTGGGAAATCTTGACTGGGGAAGAACCATATGCTAACATGCACTGTGGCGCTATCATAGGAGGTATTGTCAATAATACGCTCAGGCCTCCAATTCCGAAAAGATGTGATCCTGAGTGGAAAAAGCTGATGGAAGAGTGCTGGTGTCCTGATCCCGCAGCCAGGCCAACCTTCACAGAAATTAAAAATAGACTTCGCAACATGTCAGCTGCACTGCCAAAAAAGAGATATAACATTGGTCGTCGATGA 3564 0.3976 MNNEGPGISGKHYIDALSVGFSDKISSDNDVDNVCLQTGEEFSSEFLRDRVALRRFPIISDADQHLPKRLDLNIKDNNYELVYEDLKQVLGLRRTDSDNNSDLSDVALARGYATEIDNRAYPNNLNRYHRELGGFRQASDTFSNQVSSKFSEGNGCEQVNSGSNTPSIYVIESPHSCRPHGSVLSDGSFYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIRKNITWEELMKKTAAICSQTHVIKYQLPGEDLDALISVCSNEDLHHMIEEYEELERAGGSQRLRIFLIPSNECESPSSNEARVNQPSDADYHYVVAVNGMLDPSLRKNSNGPSLACHTSQFGNTSDYNSLHFHRESSTSTFASEMKDCSPTSPNLAGILSKPGPQFLTALKVAGKSFNQMPHLSPIFEQSKDPNLQIFIDKPHNAINESINPFVVEEVPRDKPLYEDNTNYVDPVAYYKNFAQGPTCVNYQPNNQNIVESDQIRKPNENLHLHRRIKSNELVSSAVCNLTNINFERPLVTNEGSYHFNKILSHHHESSSLFSESDFGEGSCYRMLHACSNSTLKENDENYKAPLQFPLGVKRDNLPSPKNSSSLEECSLQPGEIIDRKEHLSKYQNFPIFGRTDSYKRVSEIAKERLQRADKSNDFFDENIGAMSQDNAIDLKHIQYIYSPHGVCSSSPDLQNSECDVSTASFIPLESPRNPRGQPHGLPLDRTTSELSMRSQKSSIHHRYSMSETKDSQSLLPGSFELRHIESLTDKESTLPISYMDMDFSSLREVVIPVEDPAYYLHEKGENTVTKNQSSEYITEFRVNKLVPESVTVFKGPMDISSGIQSSLKVVPNVVEEAEVEPTYPEKKGIECDNPESESKHAKSDSGNFNELTGGRATSETEAEIYGLQNIENDDLEELHELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGRLSEQDRLTKDFWREAQILSTLHHPNVVAFYGVVPDGPGGTLATVTEYMVHGSLRNVLMKKEKVLDRRKRLMIAMDAAFGMEYLHLKRIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSCRVSEKVDIFSFGIAMWEILTGEEPYANMHCGAIIGGIVNNTLRPPIPKRCDPEWKKLMEECWCPDPAARPTFTEIKNRLRNMSAALPKKRYNIGRR 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01854 1187 ProSiteProfiles Protein kinase domain profile. 907 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01854 1187 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1032 1044 IPR008271 GO:0004672|GO:0006468
Cca02g01854 1187 MobiDBLite consensus disorder prediction 852 876 - -
Cca02g01854 1187 Gene3D Phosphorylase Kinase; domain 1 900 994 - -
Cca02g01854 1187 CDD STKc_MAP3K-like 913 1170 - -
Cca02g01854 1187 Gene3D - 211 294 - -
Cca02g01854 1187 Gene3D Transferase(Phosphotransferase) domain 1 995 1184 - -
Cca02g01854 1187 MobiDBLite consensus disorder prediction 852 888 - -
Cca02g01854 1187 CDD PB1_UP2 196 292 - -
Cca02g01854 1187 Pfam Protein tyrosine and serine/threonine kinase 909 1170 IPR001245 GO:0004672|GO:0006468
Cca02g01854 1187 Pfam PB1 domain 208 292 IPR000270 GO:0005515
Cca02g01854 1187 PRINTS Tyrosine kinase catalytic domain signature 989 1002 IPR001245 GO:0004672|GO:0006468
Cca02g01854 1187 PRINTS Tyrosine kinase catalytic domain signature 1026 1044 IPR001245 GO:0004672|GO:0006468
Cca02g01854 1187 PRINTS Tyrosine kinase catalytic domain signature 1097 1119 IPR001245 GO:0004672|GO:0006468
Cca02g01854 1187 PRINTS Tyrosine kinase catalytic domain signature 1141 1163 IPR001245 GO:0004672|GO:0006468
Cca02g01854 1187 ProSitePatterns Protein kinases ATP-binding region signature. 913 934 IPR017441 GO:0005524
Cca02g01854 1187 MobiDBLite consensus disorder prediction 698 743 - -
Cca02g01854 1187 PANTHER SERINE-THREONINE PROTEIN KINASE 95 1183 - -
Cca02g01854 1187 SUPERFAMILY CAD & PB1 domains 208 301 - -
Cca02g01854 1187 SMART serkin_6 907 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01854 1187 SMART PB1_new 207 294 IPR000270 GO:0005515
Cca02g01854 1187 SUPERFAMILY Protein kinase-like (PK-like) 896 1170 IPR011009 -
Cca02g01854 1187 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 95 1183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01854 Cca-Chr2 37923011 37930256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01854 192 333 MAP Kinase Kinase Kinase AT1G16270 57.639 4.05e-41 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Cca02g01854 PK_Tyr_Ser-Thr 2.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01854 - - gmx:100810711 1900.56