Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01842 ATGGGAAAGTACATGAAGAAAGCGAAGCCCAAAGGAGAACTCGCGCTGGTGGAGTccaccaccaccaacaccaccacctccTACATGGGGGTTCGAACCCGCGCCAAAACCCTAGCGCTCCAGAAGTCCCACCCTCAGCCCGAACACCCTCCCGCACCCGATTCCTACCTCCAGCTTCGGAGTCGGCGCCTCCGCAAGCCTCCGATTTCGCTCCACTCCCCCAAGCGCCAAAGACACTCCAACCCTAAATCCCCAATCCCCGACCCTCCCAGGCTCGGACTCGCATCGGAGCGCGAGGAGACCGCTCTGCATGAGAATGCGGAGCCTCAGGAAGCCTCCTTCGGAGAAAATGTTTTGGATTTTGAAGGGAGAGAGAGAAGCACCAGGGAATCCACACCTTGCAGTTTGATAAGGGACTCGGATACTGTCAGGACTCCAGGTTCAACTACCAGGCCTACTTGCTCAACTGAAGCCTATCGAAGAACAGAGCATGCAGCTAGAAGGCAAATCCCAACCTCACGTGAAATGGATGAATTCTTTGCTGAAATTGAAGAGGCTCAGCAAAGGCAGTTCATTGAGAAGTATGTTTCAGCGTTTTTTTATATTGGTTTTCTTAGTTCTTTCTTACTCGACTGCAATGTCTGCTACATCCCCACAAACTAA 663 0.5023 MGKYMKKAKPKGELALVESTTTNTTTSYMGVRTRAKTLALQKSHPQPEHPPAPDSYLQLRSRRLRKPPISLHSPKRQRHSNPKSPIPDPPRLGLASEREETALHENAEPQEASFGENVLDFEGRERSTRESTPCSLIRDSDTVRTPGSTTRPTCSTEAYRRTEHAARRQIPTSREMDEFFAEIEEAQQRQFIEKYVSAFFYIGFLSSFLLDCNVCYIPTN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01842 220 PIRSF CKI_KRP_plant 1 196 IPR044275 GO:0004861|GO:0045736|GO:0051726
Cca02g01842 220 MobiDBLite consensus disorder prediction 16 32 - -
Cca02g01842 220 MobiDBLite consensus disorder prediction 133 156 - -
Cca02g01842 220 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 195 IPR044275 GO:0004861|GO:0045736|GO:0051726
Cca02g01842 220 MobiDBLite consensus disorder prediction 65 79 - -
Cca02g01842 220 MobiDBLite consensus disorder prediction 123 168 - -
Cca02g01842 220 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 1 195 - -
Cca02g01842 220 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01842 Cca-Chr2 37805574 37808348 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01842 1 195 Core Cell Cycle Gene Families AT5G48820 38.667 3.02e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01842 - - gmx:100781000 327.02