Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01834 ATGTTACTGGGACTTGCCGTCATTGCTTTAGGATTCACGTATTCGCCCCCTCTCTGCTATGGGGAATTAGATGGCACTGAGCTTCCTTCAGTGCCAGATCCCGAAGCTCAAAACAAGGAAGTAATGCGACGTTTAGAATTTCAGTCAGCGGAATTTCATGATCTTATAGTTGTCCATGCAACCCATTGTCGTTCTAGACATTGCCAATATCCAAATTGTGGGAGGGTGAAGGGGATTTTCTATCATGGGAGGCATTGCACAGCACGTTATCATGGAGGTTGTGCTATATGCAGGAAAATGTGGTATTTGATTCAAATCCATGGTCGTGACTTCTGCAAGGTATCTGAATGCGGTGTACCAGTTTGCAGCCTCCGTCGTTCTCTGCCGCTCGCTGCTGTCCGCCGCCATTTCCGGGTTTGGTTTGATTTCGGAAAGAAATGGAGTTTGTTAACCGAGTAG 459 0.4684 MLLGLAVIALGFTYSPPLCYGELDGTELPSVPDPEAQNKEVMRRLEFQSAEFHDLIVVHATHCRSRHCQYPNCGRVKGIFYHGRHCTARYHGGCAICRKMWYLIQIHGRDFCKVSECGVPVCSLRRSLPLAAVRRHFRVWFDFGKKWSLLTE 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01834 152 Gene3D TAZ domain 40 137 IPR035898 -
Cca02g01834 152 ProSiteProfiles Zinc finger TAZ-type profile. 40 130 IPR000197 -
Cca02g01834 152 Pfam TAZ zinc finger 56 122 IPR000197 -
Cca02g01834 152 PANTHER CBP/P300-RELATED 31 124 IPR013178 GO:0004402|GO:0006355|GO:0016573
Cca02g01834 152 SUPERFAMILY TAZ domain 55 123 IPR035898 -
Cca02g01834 152 PANTHER HISTONE ACETYLTRANSFERASE HAC12 31 124 - -
Cca02g01834 152 SMART TAZ_2 42 123 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01834 Cca-Chr2 37722221 37726317 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Cca02g01834 zf-TAZ 9.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01834 K04498 - ccaj:109812675 118.242