Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01794 ATGACTAAATTCATGGAACAAAGAAGTGTTTCATATGTGCCACACCTTTTCATGGTCTTAGTCCAGTTGGGTTATACCCTCTTATATTTCATCACTGAAGCCTCGTTTAACCATGGGATGAGCCCTCATGTGTATGTAACCTATCGACATCTTGTGGCTGCGGTTGTGATGTTCCCTTTTGCATACTTTCTGGAGAGAAAAGCCAGACCAAAGCTGACATTTTGTCTTTTCATGGAAATTTTTGTGCTTTCTCTGTTGGGGGTTAGTGTGACTGTTAATATATACTTTGCAAGCCTGAAATACACAAGTCCGACCTTTGTTGCTTCCATGATCAACACCATAGCTTCCCTTACCTTCATCATTGCAGTGGCACTCGGGTTTGAGGTTGTTGATCTTCGAAATCCTCGCGGTTTAGCAAAAGTTATTGGGACCGTGATCTCCTTAGCTGGTGTTCTGATCATGTCACTGTACAAAGGACCCGTTATGAGAAGTTTATGGCATCCACTAATCCATATTCCAGGGAAAAGTGCTGCTATCAATGAAAGCTGGTTAAAGGGTTCACTTCTTACAGTTTTAAGTTGTGTTACATGGTCTATGTGGTTCATTATGCAGGCAGCGACTTTGAAAAGATACCCTGCGCAATTGTCACTCACCACGTGGATGGGCTTTGTTGGAGCAGCACAATCAGCTGTTTTCACAGTGATAGTAGAACACAACTCTTCAGCATGGTCTTTGGGTCCAAACATTGACTTGTGGTCCACAATATACGGTGGAGTTGTCGTCGCTGGTTTGATCATCTACGTCCAACTATGGTGCACTGAGAAAAAAGGGCCAGTTTTTGTCACAATGTTTAACCCTCTTAGTACCATATTGGTGGCGATTCTGGCCTACTTTGTCCTCGGAGAGAAACTTTACTTGGGCAGCATCATAGGTACATTTGTTGTCATCATTGGTCTGTACTTGCTGTTGTGGGGCAAAGAAAGTGACCAAAAGGTTTGTATGAAAACCAAAGATAAATCGCAGTGCGGTGCTGAAGATCTAGAATGCAGAATATAG 1056 0.428 MTKFMEQRSVSYVPHLFMVLVQLGYTLLYFITEASFNHGMSPHVYVTYRHLVAAVVMFPFAYFLERKARPKLTFCLFMEIFVLSLLGVSVTVNIYFASLKYTSPTFVASMINTIASLTFIIAVALGFEVVDLRNPRGLAKVIGTVISLAGVLIMSLYKGPVMRSLWHPLIHIPGKSAAINESWLKGSLLTVLSCVTWSMWFIMQAATLKRYPAQLSLTTWMGFVGAAQSAVFTVIVEHNSSAWSLGPNIDLWSTIYGGVVVAGLIIYVQLWCTEKKGPVFVTMFNPLSTILVAILAYFVLGEKLYLGSIIGTFVVIIGLYLLLWGKESDQKVCMKTKDKSQCGAEDLECRI 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01794 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 158 - -
Cca02g01794 351 PANTHER WAT1-RELATED PROTEIN 12 340 - -
Cca02g01794 351 PANTHER WAT1-RELATED PROTEIN 12 340 IPR030184 GO:0016021|GO:0022857
Cca02g01794 351 Pfam EamA-like transporter family 34 155 IPR000620 GO:0016020|GO:0016021
Cca02g01794 351 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020|GO:0016021
Cca02g01794 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01794 Cca-Chr2 37324601 37327459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01794 14 350 Nodulin-like Gene Family AT5G07050 41.714 9.40e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01794 - - gmx:100527877 607.831