Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01783 ATGCCAGAAGGACAACTAGGAGTGCTTAATGCACTCGATGTGGCCAAGACACAATGGTATCATTTCACTGCTATAGTGATTGCTGGAATGGGATTCTTCACTGATGCCTATGATCTCTTCTGCATTTCCCTTGTGACCAAGTTGCTAGGGAGGATATACTACACAGACATAACTAAACCGAAGCCTGGTGTTCTCCCTCCTAACGTGCAAGCTGCTGTGACTGGTGTTGCACTATGTGGCACTTTGGCAGGCCAACTTTTCTTTGGTTGGCTTGGTGACAAGATGGGAAGAAAGAAGGTTTATGGCTTAACTCTCATGCTCATGGTTGTGTGTTCCATTGCCTCGGGGCTCTCTTTCGGAGACTCCCCCAAGGGTGTCATGGCCACACTTTGTTTCTTCAGGTTCTGGCTTGGCTTTGGGATTGGTGGTGACTACCCTCTATCAGCCACGATCATGTCTGAATATGCCAACAAAAAGACTCGAGGGGCATTCATTGCAGCAGTGTTTGCCATGCAGGGATTTGGAATCCTGGCTGGTGGAATAGTGGCCTTGATTGTGTCATCTGCATATGACCACAAATATGATCTTCCTAGTTACCATGATGACCCTGCAGGATCAATAGTGCATTCCCTTGACTATGTTTGGCGCATCATTTTGATGTTTGGTGCAGTTCCAGCTGCACTTACCTACTACTGGCGAATGAAAATGCCTGAGACGGCTCGTTACACGGCCCTTGTAGCCAGGAATGCAAAACAAGCTGCTTCAGACATGTCCAAGGTGTTGCAAGTTGAACTTGAAGCTGAAGAGGACAAGTTGCAGAATATGGTTGAGAATGAAAGCCAAAGGTATGGTTTGTTCAGCAAGGAATTCGCCAAGCGCCATGGGCTACACTTGTTGGGAACCACAGTTACTTGGTTCTTATTGGACATTGCCTTCTACAGCCAGAACCTTTTCCAAAAGGACATTTTCAGTGCCATTGGATGGCTCCCTCCTTCACAAGAAATGAATGCAATCCATGAAGTTTATAGGATTGCAAGAGCACAAACACTTATAGCACTGTGCAGTACTGTGCCGGGGTACTGGTTTACAGTGGCGTTCATTGATTACATGGGCCGTTTCGCCATCCAATTGATGGGTTTCTTCTTCATGACAGTGTTCATGTTTGCTCTTGCCATACCATACAATCACTGGAGCAAAAAAGACAACAGAATTGGGTTTGTGGTGATGTACTCTCTCACGTTCTTTTTCTCCAATTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCAGAGATTTTCCCAGCCAGGCTAAGGTCTACTTGTCATGGAATTTCAGCTGCTGCAGGAAAAGCAGGAGCAATTGTTGGTGCATTTGGGTTCTTGTATGCTTCACAAAGTAAGAACCCTGCCAAGGTTGATCCAGGTTGCCCTACTGGTATTGGGATCAAGAACTCTCTCATCGTGCTTGGTGTCATCAACTTCTTTGGAATGGTATTCACCTTGTTAGTGCCAGAATCAAAGGGAAAATCATTGGAAGAGTTGAGTGGGGAGAATGAAGAAGATAGTCCTGAGGCTTTAGAGATGGCAGGGTCTGCTAGGACAGTTCCAGTTTAA 1614 0.4597 MPEGQLGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDITKPKPGVLPPNVQAAVTGVALCGTLAGQLFFGWLGDKMGRKKVYGLTLMLMVVCSIASGLSFGDSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAYDHKYDLPSYHDDPAGSIVHSLDYVWRIILMFGAVPAALTYYWRMKMPETARYTALVARNAKQAASDMSKVLQVELEAEEDKLQNMVENESQRYGLFSKEFAKRHGLHLLGTTVTWFLLDIAFYSQNLFQKDIFSAIGWLPPSQEMNAIHEVYRIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYNHWSKKDNRIGFVVMYSLTFFFSNFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYASQSKNPAKVDPGCPTGIGIKNSLIVLGVINFFGMVFTLLVPESKGKSLEELSGENEEDSPEALEMAGSARTVPV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01783 537 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857
Cca02g01783 537 TIGRFAM 2A0109: phosphate:H+ symporter 11 517 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cca02g01783 537 Coils Coil 258 282 - -
Cca02g01783 537 MobiDBLite consensus disorder prediction 512 537 - -
Cca02g01783 537 Gene3D MFS general substrate transporter like domains 272 530 IPR036259 -
Cca02g01783 537 Gene3D MFS general substrate transporter like domains 20 265 IPR036259 -
Cca02g01783 537 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 529 - -
Cca02g01783 537 CDD MFS_PhT 25 507 - -
Cca02g01783 537 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 1 529 - -
Cca02g01783 537 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
Cca02g01783 537 Pfam Sugar (and other) transporter 25 514 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01783 Cca-Chr2 37191185 37195046 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01783 1 537 Inorganic Solute Cotransporters AT2G38940 77.840 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01783 K08176 - gmx:100792177 1002.28