Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01782 ATGTACACTGATTCACTATGTCGTTGCTTATCGTGTGTCTTTTATCTTGTGGAGAAGATAGAGTCCGCTGCAGTTAAATACGGAACCATACCCTCCATTCTCAGCAATCATAACATTCCTTCTCTCTCTCTCTCTGGTATTCTTATACGAGGAACACTATCCCACGTTCTCTCTTTTTTCCCTGCAAAGACCCTTTCTTCTCTCTCAGGTTGTGACATAAGACACAGAAACATGGCTAGGGAACAGTTGCAAGTGCTTAATGCGCTGGATTCAGCGAAGACACAATGGTACCACTTCACAGCAATTGTGGTTGCTGGAATGGGTTTCTTCACTGACGCCTATGATCTGTTCTGCATCTCCCTTGTCACCAAATTGCTTGGTCGCATATACTACTATGAAGGCCCCGAGAAGCCTGGATCTCTGCCATCAAATGTTTCTGCTGCAATCAATGGTGTTGCATTCTGTGGAACCCTTGCAGGCCAACTTTTCTTTGGTTGGCTTGGTGACAAATTGGGAAGGAAACGTGTCTACGGGATGACCCTTATGCTCATGGTGATATGCTCAATAGCTTCTGGTCTTTCTTTTGGCAAAGAACCTAAATCTGTTATTGCTACCCTTTGCTTCTTCCGTTTCTGGCTTGGATTTGGCATTGGTGGTGACTACCCTCTTTCAGCAACTATCATGTCTGAGTATGCCAACAAGAAGACTCGTGGAGGATTCATAGCTGCTGTTTTCGCCATGCAAGGTTTTGGAATTTTGGCTGGTGGCATGGTTGCAATTGTGGTTTCAGCTGCTTTCAACGCAGTTTACCCTGCTCCAGCGTTTGAGGTTAACCCGGTTTTGTCCACAGTGCCACAAGCTGATTATGTTTGGAGGATAATCTTGATGTTTGGTGCACTACCAGCTTTGCTTACCTACTATTGGCGTATGAAAATGCCTGAGACTGCAAGGTACACTGCCTTGGTTGCCAAGAATGCTAAACAAGCAGCTGCAGACATGTCAAAGGTGTTGCAGGTTGAGATAGAAGAGGAGAAAGTTCAGCAATCGGAGACACAAAGAGGGAATGAATTTGGCTTGTTCTCCACACAGTTCCTTCGCCGACATGGACTTCACCTGGTTGGAACATGCACCACTTGGTTCCTCTTGGACATTGCCTATTATAGTCAGAATCTTTTCCAGAAGGACATTTTCAGTGCAATAGGTTGGATTGCTGAGGCAAAAACCATGAGTGCCATTGAAGAGGTTTACAAAATTGCTAGAGCACAGACCCTCATAGCCCTTTGCAGCACTGTCCCTGGTTACTGGTTCACAGTGGCACTCATTGACAAGATAGGAAGATTTTCAATTCAGTTGATGGGGTTTTTCTTCATGACTGTGTTCATGTTTGCATTGGCCATTCCATACCACCACTGGACCATGAAGGGCAATCATATTGGGTTTGTTGTGATGTATTCATTGACCTTCTTCTTTTCCAATTTTGGTCCAAATGCCACCACATTTGTGGTGCCAGCAGAGATTTTCCCTGCAAGGCTAAGGTCAACATGCCATGGCATATCAGCTGCAGCTGGGAAAGCTGGAGCAATGGTAGGGGCTTTTGGCTTCCAGTTTGCAGAAAATGGCATTGGAGTGAGGAATACCCTTATAATTTTGGGTGCGGTTAACTTCTTGGGGATGGTGTTTACATTCTTGGTGCCTGAATCTAAAGGAAAATCCTTGGAGGAGATGTCTGGTGAAGCTGAAGAAGAGACTACTGCTACAACAGAATCAGCATTGGAGGCTGGTCATGGAGTTAGGACTTCTGTGTAA 1806 0.4513 MYTDSLCRCLSCVFYLVEKIESAAVKYGTIPSILSNHNIPSLSLSGILIRGTLSHVLSFFPAKTLSSLSGCDIRHRNMAREQLQVLNALDSAKTQWYHFTAIVVAGMGFFTDAYDLFCISLVTKLLGRIYYYEGPEKPGSLPSNVSAAINGVAFCGTLAGQLFFGWLGDKLGRKRVYGMTLMLMVICSIASGLSFGKEPKSVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGGFIAAVFAMQGFGILAGGMVAIVVSAAFNAVYPAPAFEVNPVLSTVPQADYVWRIILMFGALPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVEIEEEKVQQSETQRGNEFGLFSTQFLRRHGLHLVGTCTTWFLLDIAYYSQNLFQKDIFSAIGWIAEAKTMSAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFSIQLMGFFFMTVFMFALAIPYHHWTMKGNHIGFVVMYSLTFFFSNFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAMVGAFGFQFAENGIGVRNTLIILGAVNFLGMVFTFLVPESKGKSLEEMSGEAEEETTATTESALEAGHGVRTSV 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01782 601 Gene3D MFS general substrate transporter like domains 97 593 IPR036259 -
Cca02g01782 601 ProSiteProfiles Major facilitator superfamily (MFS) profile. 101 569 IPR020846 GO:0022857
Cca02g01782 601 MobiDBLite consensus disorder prediction 573 601 - -
Cca02g01782 601 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 81 589 - -
Cca02g01782 601 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 81 589 - -
Cca02g01782 601 Pfam Sugar (and other) transporter 103 576 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cca02g01782 601 TIGRFAM 2A0109: phosphate:H+ symporter 88 578 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cca02g01782 601 CDD MFS_PhT 102 568 - -
Cca02g01782 601 SUPERFAMILY MFS general substrate transporter 87 576 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01782 Cca-Chr2 37170046 37174161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01782 78 582 Inorganic Solute Cotransporters AT3G54700 78.805 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01782 K08176 - gmx:100792711 925.62