Home
Resource
Genome
JBrowse
Transcriptome
Metabolomics
Pan-genome
External database links
Search
Annotation
Pathway
Duplication type
Transposable elements
Regulatory proteins (RPs)
N6-methyladenosine (m6A)
Browse
Syn-based OGs
Gene-families
Synteny
Syn-Blocks
Syn-Dotplots
Deco-Alignments
Pvu_syntenic
Vvi_syntenic
WGDs- Genes
Anc-Genome
Anc-Reference
Tools
All tools
Genome browsing and annotation
Jbrowse
ShinyCircos
Interproscan
iTAK
Dupgen finder
Homology search and alignment
Bl-match
Seq-fatch
Blast
Diamond
Bi-visualazition
Synteny inference
MCScanX
ColinearScan
Synviso
Syn-blocks-stat
B-Dotter
BB-Dotter
BK-Dotter
Evaluation of nucleotide mutation
ParaAT
KaKs calculator
NG-KaKs-Cal
Paleogenome fractionation
Paleo-gene identifier
Syn-deco generator
Paleo-gene_RI
Paleo-gene_RII
P-index-calculator
Multi-syn-phytre
Gene structure and evolution
Codonw
Cpgfinder
MEME
GSDS
Hmmer
Pfam
FastTree
IQ-Tree2
Multigene-align
Heatmap
Lollipop
Gmapping
GF-Circos
Other auxiliary tools
GC-calculator
Seqlenth-calculator
Genstr-counter
Gam-Calculator
SAF-converter
BDI-finder
BDI-deduplicator
BDI-extractor
BDI-combiner
Seq-corrector
Subtree-splitter
Sptaxon-accessor
SS-extractor
WinO-WGDI
Block_run
KaKs calculate
Blast dotplot
Ks dotplot
Block_info
Correspondence
Statistics
Overview
Phylogenetic tree
Identification of polyploidy
Bar chart
Heatmap
Gene function annotation
Functional genes
Transcription factor
N6-methyladenosine(m6A)
Bar chart
Heatmap
Transposable elements
Documentation
Platform Manual
Pipeline flow examples
L-Wikipedia
Species introduce
Literatures
Common pests
Diseases
Economic value
Planting methods
About
Submission
Community
Contact
Gene search
Sequence information
Show
10
25
50
100
entries
Search:
Select
Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca02g01782
ATGTACACTGATTCACTATGTCGTTGCTTATCGTGTGTCTTTTATCTTGTGGAGAAGATAGAGTCCGCTGCAGTTAAATACGGAACCATACCCTCCATTCTCAGCAATCATAACATTCCTTCTCTCTCTCTCTCTGGTATTCTTATACGAGGAACACTATCCCACGTTCTCTCTTTTTTCCCTGCAAAGACCCTTTCTTCTCTCTCAGGTTGTGACATAAGACACAGAAACATGGCTAGGGAACAGTTGCAAGTGCTTAATGCGCTGGATTCAGCGAAGACACAATGGTACCACTTCACAGCAATTGTGGTTGCTGGAATGGGTTTCTTCACTGACGCCTATGATCTGTTCTGCATCTCCCTTGTCACCAAATTGCTTGGTCGCATATACTACTATGAAGGCCCCGAGAAGCCTGGATCTCTGCCATCAAATGTTTCTGCTGCAATCAATGGTGTTGCATTCTGTGGAACCCTTGCAGGCCAACTTTTCTTTGGTTGGCTTGGTGACAAATTGGGAAGGAAACGTGTCTACGGGATGACCCTTATGCTCATGGTGATATGCTCAATAGCTTCTGGTCTTTCTTTTGGCAAAGAACCTAAATCTGTTATTGCTACCCTTTGCTTCTTCCGTTTCTGGCTTGGATTTGGCATTGGTGGTGACTACCCTCTTTCAGCAACTATCATGTCTGAGTATGCCAACAAGAAGACTCGTGGAGGATTCATAGCTGCTGTTTTCGCCATGCAAGGTTTTGGAATTTTGGCTGGTGGCATGGTTGCAATTGTGGTTTCAGCTGCTTTCAACGCAGTTTACCCTGCTCCAGCGTTTGAGGTTAACCCGGTTTTGTCCACAGTGCCACAAGCTGATTATGTTTGGAGGATAATCTTGATGTTTGGTGCACTACCAGCTTTGCTTACCTACTATTGGCGTATGAAAATGCCTGAGACTGCAAGGTACACTGCCTTGGTTGCCAAGAATGCTAAACAAGCAGCTGCAGACATGTCAAAGGTGTTGCAGGTTGAGATAGAAGAGGAGAAAGTTCAGCAATCGGAGACACAAAGAGGGAATGAATTTGGCTTGTTCTCCACACAGTTCCTTCGCCGACATGGACTTCACCTGGTTGGAACATGCACCACTTGGTTCCTCTTGGACATTGCCTATTATAGTCAGAATCTTTTCCAGAAGGACATTTTCAGTGCAATAGGTTGGATTGCTGAGGCAAAAACCATGAGTGCCATTGAAGAGGTTTACAAAATTGCTAGAGCACAGACCCTCATAGCCCTTTGCAGCACTGTCCCTGGTTACTGGTTCACAGTGGCACTCATTGACAAGATAGGAAGATTTTCAATTCAGTTGATGGGGTTTTTCTTCATGACTGTGTTCATGTTTGCATTGGCCATTCCATACCACCACTGGACCATGAAGGGCAATCATATTGGGTTTGTTGTGATGTATTCATTGACCTTCTTCTTTTCCAATTTTGGTCCAAATGCCACCACATTTGTGGTGCCAGCAGAGATTTTCCCTGCAAGGCTAAGGTCAACATGCCATGGCATATCAGCTGCAGCTGGGAAAGCTGGAGCAATGGTAGGGGCTTTTGGCTTCCAGTTTGCAGAAAATGGCATTGGAGTGAGGAATACCCTTATAATTTTGGGTGCGGTTAACTTCTTGGGGATGGTGTTTACATTCTTGGTGCCTGAATCTAAAGGAAAATCCTTGGAGGAGATGTCTGGTGAAGCTGAAGAAGAGACTACTGCTACAACAGAATCAGCATTGGAGGCTGGTCATGGAGTTAGGACTTCTGTGTAA
1806
0.4513
MYTDSLCRCLSCVFYLVEKIESAAVKYGTIPSILSNHNIPSLSLSGILIRGTLSHVLSFFPAKTLSSLSGCDIRHRNMAREQLQVLNALDSAKTQWYHFTAIVVAGMGFFTDAYDLFCISLVTKLLGRIYYYEGPEKPGSLPSNVSAAINGVAFCGTLAGQLFFGWLGDKLGRKRVYGMTLMLMVICSIASGLSFGKEPKSVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGGFIAAVFAMQGFGILAGGMVAIVVSAAFNAVYPAPAFEVNPVLSTVPQADYVWRIILMFGALPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVEIEEEKVQQSETQRGNEFGLFSTQFLRRHGLHLVGTCTTWFLLDIAYYSQNLFQKDIFSAIGWIAEAKTMSAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFSIQLMGFFFMTVFMFALAIPYHHWTMKGNHIGFVVMYSLTFFFSNFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAMVGAFGFQFAENGIGVRNTLIILGAVNFLGMVFTFLVPESKGKSLEEMSGEAEEETTATTESALEAGHGVRTSV
601
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Annotation information
Show
10
25
50
100
entries
Search:
Select
Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca02g01782
601
Gene3D
MFS general substrate transporter like domains
97
593
IPR036259
-
Cca02g01782
601
ProSiteProfiles
Major facilitator superfamily (MFS) profile.
101
569
IPR020846
GO:0022857
Cca02g01782
601
MobiDBLite
consensus disorder prediction
573
601
-
-
Cca02g01782
601
PANTHER
INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE
81
589
-
-
Cca02g01782
601
PANTHER
SOLUTE CARRIER FAMILY 22 MEMBER
81
589
-
-
Cca02g01782
601
Pfam
Sugar (and other) transporter
103
576
IPR005828
GO:0016021|GO:0022857|GO:0055085
Cca02g01782
601
TIGRFAM
2A0109: phosphate:H+ symporter
88
578
IPR004738
GO:0005315|GO:0006817|GO:0016021
Cca02g01782
601
CDD
MFS_PhT
102
568
-
-
Cca02g01782
601
SUPERFAMILY
MFS general substrate transporter
87
576
IPR036259
-
Showing 1 to 9 of 9 entries
Previous
1
Next
Select All
Download Selected Rows
Duplication type information
Show
10
25
50
100
entries
Search:
Select
Gene
Chromosome
Start
End
Duplicated_type
Cca02g01782
Cca-Chr2
37170046
37174161
Wgd
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Functional genes information
Show
10
25
50
100
entries
Search:
Select
Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca02g01782
78
582
Inorganic Solute Cotransporters
AT3G54700
78.805
0.0
846
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Pathway information
Show
10
25
50
100
entries
Search:
Select
Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca02g01782
K08176
-
gmx:100792711
925.62
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows