LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca02g01782	ATGTACACTGATTCACTATGTCGTTGCTTATCGTGTGTCTTTTATCTTGTGGAGAAGATAGAGTCCGCTGCAGTTAAATACGGAACCATACCCTCCATTCTCAGCAATCATAACATTCCTTCTCTCTCTCTCTCTGGTATTCTTATACGAGGAACACTATCCCACGTTCTCTCTTTTTTCCCTGCAAAGACCCTTTCTTCTCTCTCAGGTTGTGACATAAGACACAGAAACATGGCTAGGGAACAGTTGCAAGTGCTTAATGCGCTGGATTCAGCGAAGACACAATGGTACCACTTCACAGCAATTGTGGTTGCTGGAATGGGTTTCTTCACTGACGCCTATGATCTGTTCTGCATCTCCCTTGTCACCAAATTGCTTGGTCGCATATACTACTATGAAGGCCCCGAGAAGCCTGGATCTCTGCCATCAAATGTTTCTGCTGCAATCAATGGTGTTGCATTCTGTGGAACCCTTGCAGGCCAACTTTTCTTTGGTTGGCTTGGTGACAAATTGGGAAGGAAACGTGTCTACGGGATGACCCTTATGCTCATGGTGATATGCTCAATAGCTTCTGGTCTTTCTTTTGGCAAAGAACCTAAATCTGTTATTGCTACCCTTTGCTTCTTCCGTTTCTGGCTTGGATTTGGCATTGGTGGTGACTACCCTCTTTCAGCAACTATCATGTCTGAGTATGCCAACAAGAAGACTCGTGGAGGATTCATAGCTGCTGTTTTCGCCATGCAAGGTTTTGGAATTTTGGCTGGTGGCATGGTTGCAATTGTGGTTTCAGCTGCTTTCAACGCAGTTTACCCTGCTCCAGCGTTTGAGGTTAACCCGGTTTTGTCCACAGTGCCACAAGCTGATTATGTTTGGAGGATAATCTTGATGTTTGGTGCACTACCAGCTTTGCTTACCTACTATTGGCGTATGAAAATGCCTGAGACTGCAAGGTACACTGCCTTGGTTGCCAAGAATGCTAAACAAGCAGCTGCAGACATGTCAAAGGTGTTGCAGGTTGAGATAGAAGAGGAGAAAGTTCAGCAATCGGAGACACAAAGAGGGAATGAATTTGGCTTGTTCTCCACACAGTTCCTTCGCCGACATGGACTTCACCTGGTTGGAACATGCACCACTTGGTTCCTCTTGGACATTGCCTATTATAGTCAGAATCTTTTCCAGAAGGACATTTTCAGTGCAATAGGTTGGATTGCTGAGGCAAAAACCATGAGTGCCATTGAAGAGGTTTACAAAATTGCTAGAGCACAGACCCTCATAGCCCTTTGCAGCACTGTCCCTGGTTACTGGTTCACAGTGGCACTCATTGACAAGATAGGAAGATTTTCAATTCAGTTGATGGGGTTTTTCTTCATGACTGTGTTCATGTTTGCATTGGCCATTCCATACCACCACTGGACCATGAAGGGCAATCATATTGGGTTTGTTGTGATGTATTCATTGACCTTCTTCTTTTCCAATTTTGGTCCAAATGCCACCACATTTGTGGTGCCAGCAGAGATTTTCCCTGCAAGGCTAAGGTCAACATGCCATGGCATATCAGCTGCAGCTGGGAAAGCTGGAGCAATGGTAGGGGCTTTTGGCTTCCAGTTTGCAGAAAATGGCATTGGAGTGAGGAATACCCTTATAATTTTGGGTGCGGTTAACTTCTTGGGGATGGTGTTTACATTCTTGGTGCCTGAATCTAAAGGAAAATCCTTGGAGGAGATGTCTGGTGAAGCTGAAGAAGAGACTACTGCTACAACAGAATCAGCATTGGAGGCTGGTCATGGAGTTAGGACTTCTGTGTAA	1806	0.4513	MYTDSLCRCLSCVFYLVEKIESAAVKYGTIPSILSNHNIPSLSLSGILIRGTLSHVLSFFPAKTLSSLSGCDIRHRNMAREQLQVLNALDSAKTQWYHFTAIVVAGMGFFTDAYDLFCISLVTKLLGRIYYYEGPEKPGSLPSNVSAAINGVAFCGTLAGQLFFGWLGDKLGRKRVYGMTLMLMVICSIASGLSFGKEPKSVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGGFIAAVFAMQGFGILAGGMVAIVVSAAFNAVYPAPAFEVNPVLSTVPQADYVWRIILMFGALPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVEIEEEKVQQSETQRGNEFGLFSTQFLRRHGLHLVGTCTTWFLLDIAYYSQNLFQKDIFSAIGWIAEAKTMSAIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFSIQLMGFFFMTVFMFALAIPYHHWTMKGNHIGFVVMYSLTFFFSNFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAMVGAFGFQFAENGIGVRNTLIILGAVNFLGMVFTFLVPESKGKSLEEMSGEAEEETTATTESALEAGHGVRTSV	601

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca02g01782	601	Gene3D	MFS general substrate transporter like domains	97	593	IPR036259	-
	Cca02g01782	601	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	101	569	IPR020846	GO:0022857
	Cca02g01782	601	MobiDBLite	consensus disorder prediction	573	601	-	-
	Cca02g01782	601	PANTHER	INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE	81	589	-	-
	Cca02g01782	601	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	81	589	-	-
	Cca02g01782	601	Pfam	Sugar (and other) transporter	103	576	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Cca02g01782	601	TIGRFAM	2A0109: phosphate:H+ symporter	88	578	IPR004738	GO:0005315\|GO:0006817\|GO:0016021
	Cca02g01782	601	CDD	MFS_PhT	102	568	-	-
	Cca02g01782	601	SUPERFAMILY	MFS general substrate transporter	87	576	IPR036259	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca02g01782	Cca-Chr2	37170046	37174161	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca02g01782	78	582	Inorganic Solute Cotransporters	AT3G54700	78.805	0.0	846

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca02g01782	K08176		-	gmx:100792711	925.62

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