Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01781 ATGAGCCAAGACCTGAAGCGAGACTACGTCGTTTATGAAGAGATAGGCCGGGGCAGATTCGGCACCGTCTTCCGCTGCTCCTCGGCGGACTCCGGAGACTCCTACGCCGTGAAATCCATCGACAAGGCGGCGATAACCGCGGCGGGAGACCCCCTGGACGCCCAATGCCTCTTGACGGAGGCAAAGATCGTTGAGCTCCTCTCCCCTCACCCTCACATCGTGAGCCTCCACGCGCTCTACGAGGACGAGACGCACCTCCACATGGTTCTCGACCTCTGCTACGAATCGGAGTTTCACCACAGCGTGATGCCCGAGGCCGCAGCCGCTTCGGTGATGTGGCAGCTCATGCAAGCCGTGGCGCACTGCCACCGCCTCGGCGTGGCGCACCGGGATATAAAGCCGGATAACATTCTCTTCGACGAGGACAGTCGGCTTAAGTTAGCCGACCTCGGCTCGGCTGAGCTTTTCAGCGAGGGCCAGCCGATGAGCGGCGTGGTGGGGACGCCGCATTACGTGGCGCCGGAGGTCCTCGCCGGGAGGGACTACAACGAGAAGGTGGACGTGTGGAGCGCCGGCGTCGTTTTCTATCAGTTGTTGGTAGGTTTTGCGCCGTTTCGCGGCGATTCCCCGGTGGAGATTTTCGAGGCCGTTGTTAGAGGCAATTTGAGGTTTCCGACGCGAGTTTTTTCCGCAGTCTCAGCCGCAGCTAAGGATCTGCTTCGTAGAATGCTGTGTCGAGACGTTTCTAGAAGGTTCTCTGCGGAACAAGTCCTGAGGCACCCGTGGTTTAGCATTTGTGAACAGAACATGCGAACAGAGTGA 822 0.5937 MSQDLKRDYVVYEEIGRGRFGTVFRCSSADSGDSYAVKSIDKAAITAAGDPLDAQCLLTEAKIVELLSPHPHIVSLHALYEDETHLHMVLDLCYESEFHHSVMPEAAAASVMWQLMQAVAHCHRLGVAHRDIKPDNILFDEDSRLKLADLGSAELFSEGQPMSGVVGTPHYVAPEVLAGRDYNEKVDVWSAGVVFYQLLVGFAPFRGDSPVEIFEAVVRGNLRFPTRVFSAVSAAAKDLLRRMLCRDVSRRFSAEQVLRHPWFSICEQNMRTE 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01781 273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Cca02g01781 273 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 1 3 268 - -
Cca02g01781 273 Gene3D Transferase(Phosphotransferase) domain 1 93 273 - -
Cca02g01781 273 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 268 - -
Cca02g01781 273 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Cca02g01781 273 ProSiteProfiles Protein kinase domain profile. 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01781 273 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Cca02g01781 273 SMART serkin_6 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01781 273 CDD STKc_CAMK 8 262 - -
Cca02g01781 273 Pfam Protein kinase domain 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01781 273 SUPERFAMILY Protein kinase-like (PK-like) 6 264 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01781 Cca-Chr2 37153287 37154800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01781 3 263 EF-hand Containing Proteins AT1G50700 39.405 4.37e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Cca02g01781 Pkinase 7.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01781 - K08794 gmx:547731 480.715