Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01770 ATGTGCGTCGTTCAGTCTCTCAACCACAGCCCTCGTTCTCTCTCTCAGTTCTCGAAAGCTCTCTTCATTCTCTCATATTTCAACGAAGTCGATTCCGGCGAGCACAACCTCAACGACGGCAAGGTTTCGTGTTTGGTCTCAAAACCATATTACCTCTTCCATTTCTTAACTTTCTCCTATTTAATCATTCACAGCTCCGCAACCGACTGGGCTCCGCCTCCTTTTTCAGCTCTGGCCTGCCCGAGTGCTGCGCTCTTCCCTACTAGGCCATTAGGGGGATTAATCTCACCAAGCTCCAGTGCGAAGGCTATAGCAGCGCTTATAGTGTCGCTCCGCTCAGGGTCCATGGGCCTGGGGACTGGTTTTATGGGATCCGCGTCCGTTATTCCGTGCAAGGGAATGATGAGTTCTGTGGAGCCTGTGAGGCCACGGGTGGCTCCTGTGGCTTTGCTTCTGATGGGATCAGGCAGCTCTGTATGTGCGGGGACTTCAATTCCACCTCCAATTGTGGTTCAGAGTGAGGTTGCAGCTGGAAGTATAAATCTTAATGGAACTCTTACAGTGGAAGTGCGGAGACCAGGTGGCGAGACTGTTATGGGAGACATTGTTCGCATAGTTGAAGAGGCACAAAGTAGGGAAGCTCCTGTACAGCGGTTGGCTGACAAGATGCAGCTCCAAGATGGTTCTGTTGGTAAAGTGATTAACCTTTCACATGTTCTGGCTGCGTCCTTCGCCGGAATAATTGTGGAGTCAATGGTGATGAGAGACCAGAAGATCGTTCCCCGCATGGACAAGACAGACTCTGGTCGTGTTCAAAAGCTTGAGAAGTTCTCTCACTATGTTGCCAGGCAAATGGGATTTGTAGAGAACGAGGTTCCGGAGCTGTGTAGATTGGCACACGAGTATTTGATAAAACCCAAGGAGAGTGAGGAAAACATATCTGAATATATTGGACACCAGAAGGACCCTACTTTATACGGGAAATTGATCGATGAGTTTGACAGATGCATCCTTAGTTATTTCGCATTTCATTGGAACCAAGCTTCTTATGTCATTAGTCAGGTATTGAGTGTTGAGTCCCCTAAGAAAATAGAGCTAAAAAAGATTCTATTGGCAGCTACAAGGCAACAAAGGTTTGAGATAGTGACCAAGAATCTAAAGGTGGCAAGAGTGTTCTCTACATTAGTAGAAGAGATGAAAGCAATAAATACAAAGGTTGACTCACAAAGAAAGAAAGATACAATCCCTAGTTCCCAAAGTGAGAGGAGTCCAGTGTTGCTACTTATGGGAGGTGGCATGGGAGCTGGAAAAAGCACTATTCTTAAAGACATTCTTAAAGAATCATTTTGGTCAGGAGCAGCTTCAAATGTTGTGGTGGTTGAGGCAGATGCTTTTAAGGAGAGTGATGTCATATATAAAGCCCTTAACTCTAGGGGTCACCATCATGACATGCTCCAAACTGCTGAATTGGTACATCAATCTTCCATAGATGCTGCATCATCTCTACTAGTGACAGCTCTAAATGAGGGTCGAGATGTGATCATGGATGGTACCTTATCTTGGGCACCATTTGTGGAGCAGACTATTGCCATGGCAAGAAATGTTCACAAATACAAGTACCGAATGGGAGTAGGGTATAAAGTGGCTAAAGATGGAACAATTATTGAAAATTACTGGGAGCAAGTAAATGAGACAGAAGAAAAACATCAACCAGAGGAAAATTATGACAAAGAACCATGCATGCAAAAGCCTTATAGAATTGAGCTAGTTGGTGTGGTTTGTGATGGATACCTAGCTGTTGTTAGGGGCATTAGGAGAGCTATTATGACGGGAAGGGCAGTGAGGGTGAACTCACAATTGAAATCTCATAAAAGATTTGCTAATGCATTTCCAAGATTTTGCAAACTTGTTGATAATGCTAGGCTTTATTGCACAAATGTTGTTGGTGGTCCACCAAAGCTCATATGGTGGAAGGATGATGATCACAATCTAGCAGAGGATCCCAAAGATATCGAATACTTGGAAATGATACGCAGTGTAAATGTTGAAGCTAATTCCATCTACGAACTTTACAAGGAACCCAACATAATAATGGGACCAGGTTCTATTTGGAATGACATTGTTCTTTCACCTTCAAGGTCTAATGATCAAAAGGAATTGAGGAAATCCATTCAGGAAATAGAAAAATCCATCAGGAAACGGTAA 2205 0.4395 MCVVQSLNHSPRSLSQFSKALFILSYFNEVDSGEHNLNDGKVSCLVSKPYYLFHFLTFSYLIIHSSATDWAPPPFSALACPSAALFPTRPLGGLISPSSSAKAIAALIVSLRSGSMGLGTGFMGSASVIPCKGMMSSVEPVRPRVAPVALLLMGSGSSVCAGTSIPPPIVVQSEVAAGSINLNGTLTVEVRRPGGETVMGDIVRIVEEAQSREAPVQRLADKMQLQDGSVGKVINLSHVLAASFAGIIVESMVMRDQKIVPRMDKTDSGRVQKLEKFSHYVARQMGFVENEVPELCRLAHEYLIKPKESEENISEYIGHQKDPTLYGKLIDEFDRCILSYFAFHWNQASYVISQVLSVESPKKIELKKILLAATRQQRFEIVTKNLKVARVFSTLVEEMKAINTKVDSQRKKDTIPSSQSERSPVLLLMGGGMGAGKSTILKDILKESFWSGAASNVVVVEADAFKESDVIYKALNSRGHHHDMLQTAELVHQSSIDAASSLLVTALNEGRDVIMDGTLSWAPFVEQTIAMARNVHKYKYRMGVGYKVAKDGTIIENYWEQVNETEEKHQPEENYDKEPCMQKPYRIELVGVVCDGYLAVVRGIRRAIMTGRAVRVNSQLKSHKRFANAFPRFCKLVDNARLYCTNVVGGPPKLIWWKDDDHNLAEDPKDIEYLEMIRSVNVEANSIYELYKEPNIIMGPGSIWNDIVLSPSRSNDQKELRKSIQEIEKSIRKR 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01770 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 418 536 IPR027417 -
Cca02g01770 734 Gene3D - 398 649 IPR027417 -
Cca02g01770 734 Pfam Zeta toxin 414 533 IPR010488 GO:0005524|GO:0016301
Cca02g01770 734 Gene3D - 154 210 - -
Cca02g01770 734 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 235 731 - -
Cca02g01770 734 PANTHER UNCHARACTERIZED 235 731 IPR044802 -
Cca02g01770 734 Pfam E1-E2 ATPase 164 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01770 Cca-Chr2 36930332 36941967 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01770 175 223 Primary Pumps ATPases AT1G63440 51.020 1.52e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01770 - - gmx:100799160 744.191