Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01745 ATGGGATTCTATCTTAATCTCAAACTCAAGGCTTTCAGGCTGAAACAGTTTCTGCTAGGACATGGAGGCAGAAAAAGAAAGCACAAGAAGTTGGCAAAGCCTTCATGGATGGTGCCCATGAGATATGGTTATCATGTGGTGGAGCATAATATGATCAGTGATGGTTTTTCTGATGACTCAGACTTTGATTCAGTGGTGGCACAGAGAGAGGAAATAGATAATACAGAATTGTATTATTTTGGAATCTTTGATGCACTAATTGGAGACAGGGTTACCAACTTCATGCAGTCTCATTTCTTTGACAAGAAGCTTCAAGAGCCTCATATAACGAGAAAAAGCAAAGAGGCTCTAAAGAGAGCTTACCTGAGTGTAAGAGCAAAGATCAGAGAGGAACACGGATTAGAGGAAACATGCAGAATGGGTTCAGCTTGTGTTATGGTGATCAATGGAGAAAAACTTGTAGTAGCCAACATGGGAGATTATAGAACTGTTGTGTGCAAAGATGGCATAGCTCATCAGGCAACTGGCACATACCAACAACCACGTAAACTACATTGGTCTCGCAGACTCTTTGCAGGACACATGCTAGCATGTCTATCAGGAAGTGAAGCAGGTGCAAAGCCTTCTAGAGGCTCTGAAGTTGTGGTTAGAAGTGAATGGATCGATTCTGATACTGAATTTTTGATATTAGCAAGCAATGGCATATGGGAGGTGATGAAACAACAAGAGGCTGTGAATCTGATCAGCCATATAGAGGATCCACAAGAAGCAGCTGAATGCCTGGCAAAGGAAGCTTTGGTTAGGATGAGCAAAAGCAACATCTCATGCTTAATCATTCGCTTTGACTGA 849 0.4193 MGFYLNLKLKAFRLKQFLLGHGGRKRKHKKLAKPSWMVPMRYGYHVVEHNMISDGFSDDSDFDSVVAQREEIDNTELYYFGIFDALIGDRVTNFMQSHFFDKKLQEPHITRKSKEALKRAYLSVRAKIREEHGLEETCRMGSACVMVINGEKLVVANMGDYRTVVCKDGIAHQATGTYQQPRKLHWSRRLFAGHMLACLSGSEAGAKPSRGSEVVVRSEWIDSDTEFLILASNGIWEVMKQQEAVNLISHIEDPQEAAECLAKEALVRMSKSNISCLIIRFD 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01745 282 PANTHER ALPHABET, ISOFORM E-RELATED 5 281 - -
Cca02g01745 282 Gene3D - 57 282 IPR036457 -
Cca02g01745 282 CDD PP2Cc 71 281 IPR001932 -
Cca02g01745 282 Pfam Protein phosphatase 2C 221 274 IPR001932 -
Cca02g01745 282 Pfam Protein phosphatase 2C 73 175 IPR001932 -
Cca02g01745 282 SUPERFAMILY PP2C-like 68 282 IPR036457 -
Cca02g01745 282 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 5 281 - -
Cca02g01745 282 SMART PP2C_4 49 279 IPR001932 -
Cca02g01745 282 ProSiteProfiles PPM-type phosphatase domain profile. 59 281 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01745 Cca-Chr2 36582088 36584291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01745 1 281 PP2C-type Phosphatase Gene Family AT3G23360 46.643 1.16e-78 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01745 K19704 - gmx:100780639 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01745 02 36582088 36584291 Cca02g01745 02 36582088 36584291 ECH