Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01738 ATGGATCATGTTATTGGTGGAAAATTCAAGCTTGGGAGGAAGATTGGCAGTGGATCGTTTGGAGAGCTTTACTTAGGTGTTAATGTACAAAGTGGAGAGGAAGTTGCTGTCAAGCTGGAATCTGTGAAGACCAAGCATCCCCAGCTTCACTACGAGTCAAAATTGTATATGCTTCTTCAAGGGGGAACTGGTATACCCCATCTAAAATGGTTTGGAGTTGAGGGAGACTACAATGTCATGGTTATTGACCTCCTTGGGCCAAGTCTTGAAGACTTGTTTAACTATTGCAATAGGAAATTCACTCTGAAAACAGTTCTGATGCTGGCAGATCAGCTAATTAACAGAGTTGAGTACATGCACTCCCGGGGTTTTCTGCATCGTGATATAAAGCCTGACAACTTTTTAATGGGTTTAGGCCGTAAGGCAAATCAGGTATACATAATTGATTATGGCCTTGCAAAAAAGTATCGGGATCTTCAGACTCATAAGCATATACCATACAGGGAAAACAAAAACCTCACTGGAACTGCTCGGTATGCAAGTGTTAATACTCATCTGGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCTCTTGGTTATGTGCTCATGTACTTTTTGAGAGGAAGTCTCCCATGGCAAGGCTTGAAAGCTGGCAATAAAAAGCAAAAATATGACAAGATAAGTGAGAAAAAGATGCTTACTCCAATAGAGGTCTTATGCAAGTCATATCCATTGGAATTCACATCATACTTCCACTATTGCCGATCGTTGCGGTTTGAAGATAAGCCTGATTATTCCTATCTTAAGAGACTCTTTCGGGACCTATTCATCCGAGAAGGTTATCAGTTTGATTATGTATTTGATTGGACTATGTTGAagtatccccaaattggatccagttctagaGCGCGACCAAGTGGGAAACCAGTCATAAACCCAGGACAATCCGGAGAGAGAATAGAACGGCCTTCAGGGGGACCAGAGATCCGGGATAGATTCTCAGGTGCAGTTGAGGCCTTTGCAAGAAGGAATAGCTCTGGACTTGGTCTGCATAGTGATCATTCTAGGCATAATAGGTCTTCAGATGATGTGCCATCTTCCAAAGACGTGCAAGCTGATTCGGATAGGCCTCGCAGCTCTTCTCGTAACGGAAGTTCTTCAAAAAAGCCTGTCTTGTCAAGCAGCAGGCCGAGCTCTTCTGGTGAGCCTAGTGAAAGCCGTGCTAGCCGACTGGTCTCAAGCAGTGGCCGACTATCAACAACTCAGAGACTTCAACCTGGTTTTGAGTCCAAATCATCTTTAACTCGGCCTTCGGTGACAAGGGGTGGTGGGCGTGATGATACACTCAGGAGCTTTGAACTCCTCTCACTTGCTACTGGAAAACGCAAATGA 1395 0.4301 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLESVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYDKISEKKMLTPIEVLCKSYPLEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTMLKYPQIGSSSRARPSGKPVINPGQSGERIERPSGGPEIRDRFSGAVEAFARRNSSGLGLHSDHSRHNRSSDDVPSSKDVQADSDRPRSSSRNGSSSKKPVLSSSRPSSSGEPSESRASRLVSSSGRLSTTQRLQPGFESKSSLTRPSVTRGGGRDDTLRSFELLSLATGKRK 464
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01738 464 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01738 464 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 443 - -
Cca02g01738 464 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Cca02g01738 464 MobiDBLite consensus disorder prediction 299 330 - -
Cca02g01738 464 MobiDBLite consensus disorder prediction 378 440 - -
Cca02g01738 464 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01738 464 Gene3D Transferase(Phosphotransferase) domain 1 1 320 - -
Cca02g01738 464 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Cca02g01738 464 MobiDBLite consensus disorder prediction 350 377 - -
Cca02g01738 464 SMART serkin_6 9 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01738 464 MobiDBLite consensus disorder prediction 347 450 - -
Cca02g01738 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Cca02g01738 464 PANTHER CASEIN KINASE-RELATED 1 443 - -
Cca02g01738 464 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca02g01738 Cca-Chr2 36514950 36523346 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01738 8 213 MAP Kinase Kinase Kinase AT3G06030 25.926 1.15e-14 74.7
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Cca02g01738 Pkinase 1.8e-26 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01738 K08960 - gmx:100804897 805.438
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01738 02 36514950 36523346 Cca02g01738 02 36514950 36523346 ECH