Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01737 ATGGATAGGTGCTGGTTTAATAAGTTCAAGTCAAAGGACAAATCACAGCCTTCAAAAAACAAGGAAACTAGAGGCATTGCAAAAGAAGGGTCAAAACCCCCAACAAATGAAGAAGCACCTTCAAATGTGACCAAACAGAAGGTTGCAGCTGCAAAGCAGTACATAGAAAATCATTATAAGAAACAGATGAAGGACTTGCAGGAGAGAAAGGAACGACGCAATATGCTAGAGAAAAAGTTGGCTGATGCTGAAGTCTCTGAGGAAGAGCAGAACAATTTGCTCAAGTATTTTGAGAAAAAGGAGAGGGAATACATGCGCCTTAAGAGGCATAAAATGGGGGCTGATGATTTTGAGCCCCTGACTATGATAGGGAAGGGTGCATTTGGAGAGGTCAGAATCTGCCGAGAGAAGGCAACTGGTCATGTATATGCTATGAAGAAACTTAAGAAATCAGAGATGCTTCGTAGAGGCCAGGTTGAACATGTAAAAGCTGAGAGGAATTTACTTGCAGAAGTTGACAGCAATTGCATTGTAAAGCTTTATTGTTCCTTTCAAGATGAAGAGTATTTATATCTCATAATGGAGTATCTACCTGGTGGTGATATGATGACCTTGCTCATGAGGAAGGATATACTGACAGAAGATGAGGCCAGGTTCTATGTTGGGGAGACTGTCCTAGCTATAGAGTCAATTCATAAACATAACTATATTCATAGAGATATCAAGCCTGACAACTTGCTCCTAGATAGAAATGGTCACATGAAATTATCAGACTTTGGATTATGTAAACCACTAGACTGCAGTACACTTCAGGAAAAGGACTTCTCTATTGGAAGCAACAGAAGTGGAGCCCTCCAGAGCGATGGCCGTCCTCTGACTCCTAAAAGAAGCCAACAGGAGCAACTGCTGCATTGGCAAAAAAATAGGCGAATGCTTGCCTATTCTACAGTTGGGACACCTGACTATATTGCCCCCGAAGTCCTTCTTAAGAAAGGATATGGCATGGAATGTGATTGGTGGTCCCTAGGAGCTATTATGTATGAAATGCTAGTTGGGTATCCGCCCTTTTATTCAGATGAACCAATGTTGACTTGTAGAAAGATAGTAAATTGGAGAAATTATTTAAAATTTCCAGAAGAAGTTAAACTTTCGGCAGAGGCAAAGGATCTCATTAGTAGACTGCTATGTAATGTGGATCAGAGGCTTGGAACCAAAGGGGCTGATGAAATAAAGGCTCACCCATGGTTCAGAGGTATTGAATGGGACAAATTGTACCAAATGAAAGCTGCTTTTATTCCTGAGGTTAACGATGAATTAGATACTCAAAATTTTGAGAAGTTTGAAGAGGTTGACAACCAAACTCAATCTTCCTCAAAATCAGGCCCATGGAGAAAGATGCTGTCGTCCAAAGATGTAAACTTTGTCGGTTACACGTATAAGAACTATGAAATCGTGAATGATGATCAACTACCTGAAATTGCTGAATTGAAGAAGAAGAGCACAAAACCTAAGCGGCCATCTATTAAGACCCTATTTGATGATGAATCGGCTACAGCTGCCAATCAAACTGCCCAAGGGAGCTTCTTAAAACCCTTACCTACTCAACCAGAAGTTCCTGAGAAGAGTGAATCTCAATGA 1638 0.4078 MDRCWFNKFKSKDKSQPSKNKETRGIAKEGSKPPTNEEAPSNVTKQKVAAAKQYIENHYKKQMKDLQERKERRNMLEKKLADAEVSEEEQNNLLKYFEKKEREYMRLKRHKMGADDFEPLTMIGKGAFGEVRICREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSTLQEKDFSIGSNRSGALQSDGRPLTPKRSQQEQLLHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMLTCRKIVNWRNYLKFPEEVKLSAEAKDLISRLLCNVDQRLGTKGADEIKAHPWFRGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVDNQTQSSSKSGPWRKMLSSKDVNFVGYTYKNYEIVNDDQLPEIAELKKKSTKPKRPSIKTLFDDESATAANQTAQGSFLKPLPTQPEVPEKSESQ 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01737 545 MobiDBLite consensus disorder prediction 1 47 - -
Cca02g01737 545 SMART pkinase_C_6 417 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cca02g01737 545 Pfam Protein kinase C terminal domain 435 479 IPR017892 GO:0004674|GO:0005524|GO:0006468
Cca02g01737 545 MobiDBLite consensus disorder prediction 514 530 - -
Cca02g01737 545 SUPERFAMILY Protein kinase-like (PK-like) 91 469 IPR011009 -
Cca02g01737 545 CDD STKc_NDR_like 115 480 - -
Cca02g01737 545 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cca02g01737 545 Gene3D Phosphorylase Kinase; domain 1 107 202 - -
Cca02g01737 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Cca02g01737 545 Coils Coil 59 93 - -
Cca02g01737 545 MobiDBLite consensus disorder prediction 1 28 - -
Cca02g01737 545 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 40 519 - -
Cca02g01737 545 PANTHER SERINE/THREONINE-PROTEIN KINASE 40 519 - -
Cca02g01737 545 Pfam Protein kinase domain 119 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01737 545 ProSiteProfiles Protein kinase domain profile. 117 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01737 545 MobiDBLite consensus disorder prediction 513 545 - -
Cca02g01737 545 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Cca02g01737 545 MobiDBLite consensus disorder prediction 278 297 - -
Cca02g01737 545 Gene3D Transferase(Phosphotransferase) domain 1 203 433 - -
Cca02g01737 545 SMART serkin_6 117 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01737 Cca-Chr2 36500117 36510236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01737 3 543 AGC Kinase Gene Family AT3G23310 82.904 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Cca02g01737 Pkinase 4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01737 K08790 - gmx:100783095 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01737 02 36500117 36510236 Cca02g01737 02 36500117 36510236 ECH