Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01726 ATGGCTCGGGATGGGAGCGTCGTCCCTGCGGACCCGCAGGGAATGGCGGTTGTGAAGAAGAAGACACAGTCTTCGAGGAGTTGGATTCTGTTTGATGGCACGGGCCAAGGCTCGTTGCTGGACGTGGATAAATATGCCATCATGCATCGCGTTCAGATTCACGCTCGTGATCTCAGAATCCTTGATCCCTTGCTCTCTTACCCCTCCACCATTCTTGGTCGCGAGAAGGCCATTGTTCTTAACTTGGAGCATATCAAGGCAATTATCACCGCCGAAGAGGTATTGCTGAGAGATCCAACAGATGAAAATGTGATCCCAGTTGTTGAGGAACTGCAAAGGCGGTTGCCTCGATTAAGTGCTAATAATCAACAGCAAGGAGATGGTAAAGAGTATCTTGGTGGCCAAAATGATGCTGAAGCAGCTGAAGAAGATGAGTCACCCTTTGAATTCCGAGCCCTGGAGGTAGCTTTAGAAGCCATTTGCAGTTTTCTTGCTGCACGTACAACAGAATTGGAGATGGCTGCTTATCCTGCATTGGATGAACTTACCTCCAAGATCAGTAGTCGTAATTTGGACAGAGTTCGTAAACTGAAGAGTGCAATGACAAGGCTGACTGCTAGGGTTCAAAAGGTCAGAGACGAGCTTGAACAATTGCTGGATGATGATGATGATATGGCTGACCTATACCTCTCAAGAAAGGCAGGTTCATCATCACCAGTTAGTGGATCAGGTGCTGCAAATTGGTTTGCTGCTTCCCCAACCATAGGATCAAAGATATCTAGAGCAAGTAGAGCAAGTGTGGCAACAGCTCGTTTCGATGAAAATGATGTGGAAGAGCTTGAAATGTTACTTGAGGCTTATTTCAGTGAAATTGATCACACATTGAACAAATTAACCACACTGCGAGAGTACATTGATGATACTGAAGATTATATTAATATTCAATTTGCTAAAATGTCTTCAACTGTTGTGCAGTTAGAGCTCTTTCTTAGCTCTGGAACTGTTTGTCTTTCTTTCTACTCTTTGGTAGCTGCTATATTTGGCATGAATATCCCATATACTTGGAACCAGAACCATGGTTTCATGTTCAAATGGGTAGTTATTGTCTCAGGAGTATTTTCTGCTTTGATGTTTGTCATGATTACAGCCTATGCTCGTAAAAAGGGGGAATGTATAGATAAGAAGTTGATAGATGAGCAATTAACCCACTGTCCAGTTTGCAATGTAGACTTGGGTTGTACTCCACTCGAGAAATTAAGGCCAGATCGCATTCTGCAACATTTGAGAGAGAAAATTAGATCCCGTACAGGACAAAATACTAAGGCACCTAACAATATTCCTCTGGGCAAATTGATAGTCAAAAAAAGAAAGAAGAAATCTCTATCTTCGTTAAAAGCAAATGAAGAAATAGCCGAAGCTGCTCCAAAAAAAGATTTCATTGCCAAAGGATCAAAGCTTTCAACTCCTAAACCTGATAAAGTGAAAGATGTTAAGGAAGATGAAACCAACGATGGGGTAGAACTTTTGGAAGAAGTTTCTACAATTGGATCTGCAAGAAGAGCAAAAGCTGCAGCAAGAATAAAATTTATTCGAACTGCACCACCTCCTTCTAGTCATCAACTTGACAAAGTAACAAGAGAAGAAAAGAAAGATGATAATCAACCCCGGGTCGAATCTTCTAATGGATCTCTCAAAATTAAAATTCAGACTTCTACAAAACCAAATTCAAGTCAAAAGTTAGTCACCAACAAGATTTCAAGGAACAATGCTGAGTTGAGGAATGAAAAGACTGATGATATGGCGGAGACATTAAATAGCCTGGTGGAAAGTGCAAGCAAACGCAAGTCTCGTAATAAGTCCACCATGCAGGAAAATGGTGTCACTCCAGCACCTGTGCACTCTAATGACAATGACCCTCAGGTGCATAAGGTTGATGTCAACAAACATTGTCACAGAACAAACACTGCTGGTGATGAAAATGAGTCAACTCCTTCAGAATCAGATTCAGTCAAACGTCAAAGGACTATAAGCACCCAAGAAAAAACACTCAAGATCTCCGAGGACTTGAATTTTCCAGCACAACCTGAGATTGGTACTACAAACAATGAAAGCAACAAAGCATTTGGTCCAATCTGGTTCTGTTTGGTTGCTGCTGAAGAAAAGAAAGCAAGTGCACGATTGCCACAAATATCTTCCTGCTACCTAAGGATCAAGGATGGTAGTGTACCTGTTTCCTATATTAAAAAGTATCTGGTGAAGAAGCTTGGTCTTGCAAACGAATCTGAGGTGGAGATCACATTACTTGGTCAGCCAGTCTCATCTTCATTGCAACTGAAAAACTTAGTAGAGATGTGGTTGCAAACAGTGCCAACGAATGAGATTCAAACATCTGTTGGAAGCTCAGCCAAGGATTTTATTATGATCCTTTCATATAGTCGGAAGGCTTGA 2448 0.4163 MARDGSVVPADPQGMAVVKKKTQSSRSWILFDGTGQGSLLDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDENVIPVVEELQRRLPRLSANNQQQGDGKEYLGGQNDAEAAEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKAGSSSPVSGSGAANWFAASPTIGSKISRASRASVATARFDENDVEELEMLLEAYFSEIDHTLNKLTTLREYIDDTEDYINIQFAKMSSTVVQLELFLSSGTVCLSFYSLVAAIFGMNIPYTWNQNHGFMFKWVVIVSGVFSALMFVMITAYARKKGECIDKKLIDEQLTHCPVCNVDLGCTPLEKLRPDRILQHLREKIRSRTGQNTKAPNNIPLGKLIVKKRKKKSLSSLKANEEIAEAAPKKDFIAKGSKLSTPKPDKVKDVKEDETNDGVELLEEVSTIGSARRAKAAARIKFIRTAPPPSSHQLDKVTREEKKDDNQPRVESSNGSLKIKIQTSTKPNSSQKLVTNKISRNNAELRNEKTDDMAETLNSLVESASKRKSRNKSTMQENGVTPAPVHSNDNDPQVHKVDVNKHCHRTNTAGDENESTPSESDSVKRQRTISTQEKTLKISEDLNFPAQPEIGTTNNESNKAFGPIWFCLVAAEEKKASARLPQISSCYLRIKDGSVPVSYIKKYLVKKLGLANESEVEITLLGQPVSSSLQLKNLVEMWLQTVPTNEIQTSVGSSAKDFIMILSYSRKA 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01726 815 MobiDBLite consensus disorder prediction 664 678 - -
Cca02g01726 815 MobiDBLite consensus disorder prediction 116 144 - -
Cca02g01726 815 MobiDBLite consensus disorder prediction 638 656 - -
Cca02g01726 815 PANTHER MAGNESIUM TRANSPORTER MRS2-I 1 389 - -
Cca02g01726 815 MobiDBLite consensus disorder prediction 116 130 - -
Cca02g01726 815 CDD Mrs2_Mfm1p-like 28 389 IPR039204 -
Cca02g01726 815 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 389 IPR039204 -
Cca02g01726 815 Gene3D - 14 99 - -
Cca02g01726 815 MobiDBLite consensus disorder prediction 621 635 - -
Cca02g01726 815 Gene3D Magnesium transport protein CorA, transmembrane region 107 319 - -
Cca02g01726 815 Coils Coil 194 221 - -
Cca02g01726 815 MobiDBLite consensus disorder prediction 531 679 - -
Cca02g01726 815 MobiDBLite consensus disorder prediction 557 588 - -
Cca02g01726 815 MobiDBLite consensus disorder prediction 488 502 - -
Cca02g01726 815 MobiDBLite consensus disorder prediction 482 502 - -
Cca02g01726 815 MobiDBLite consensus disorder prediction 541 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01726 Cca-Chr2 36377128 36391824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01726 1 366 MRS2 Gene Family AT5G64560 78.804 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01726 K16075 - gmx:100810239 665.225