Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01698 ATGGGGTTTTCAGCACTGTTACTGTTGTTTCCTCTTGTGTTTTTGCTTTCAAACCCAACATGGGTGTGTGGGAATGAAGAGCTAAGAGCACTGATGGATATGAAAGCCAGTTTGGATCCAGAGAGCCGTTATCTACCCTCTTGGACTATCAATGGTGATCCATGTGATGGATCTTTTGAGGGAGTGGCATGCAATGAGAAGGGTCAGGTGGCAAACGTTTCTTTGCAGGGAAAGGGCCTCTTAGGGAAGCTTTCACCAGCCATTGCTGGCCTCAACCACTTGACCGGACTCTACTTGCATTATAACTCTTTGTATGGAGAGATACCAAGAGAAATCGCAAACTTGACTTACCTTGTTGATTTGTATTTGAATGTAAACAATCTGACTGGGGAAATCCCTCGTGAGATCGCCAGCATGGAGAACTTGCAAGTTTTGCAGCTATGTTATAATCAGTTGACAGGAAGCATTCCTATACAGCTTGGGGCTTTGAAAAACCTGAGAGTTGTTGCTTTGCAATCAAATCATTTAACTGGTGCTATCCCTGCTAGTCTAGGTGATTTGGGTGTGCTGGTGAGGCTAGATTTGAGCTCTAATAATCTCTTTGGTTCCATTCCCACTAGCCTAGCTGACGCGCCTTCACTCAAAGTTTTGGATGTTCACAACAATACTCTGTCTGGGAATGTACCTCCTGTTCTTAAGAGACTTGATGATGGGTTTCTGTATGAATACAATCTGGGCTTATGTGGAGTTGGGTTTTCATCCCTGAAAGCTTGCAATGCTTCGGATCATGTCAATTCTAGCAGACCTGAACCTTATGGAGCAGCAACAAGAGATATTCCAGAAACCGCAAATGTGAAGTTACCTTGCAATGGAACTCAGTGCCTTAATTCATCAAAATCCAATCAATCCACCACATCAATTACTGTTGGCATATTTGTGGTTATAATTGCACTGTCTGCTATTGGTATTTTAACATTCACGTTATATCGTCGGAGAAAACAAAAGGTTGGTGGTTCTTTTCATATCACTGACGGCCATCAAAGTACTGATGAAGCCATGTGTGCATATAAGAAAAATGGATCTCCTTTGGTCAGCCTTGAGTACTCTTCTGGATGGGACCCTTTGGCTGATAGTAGGACTTTCAATGGCTATAGCCAAGATATATTCCAGAGTTTGAGGTTCAACTTGGATGAAGTGGAGTCAGCTACTCAGTATTTCTCGGAGTTGAATTTGTTGGGTAAGAACTGCTATAGTGCGACATATAAGGGAGTTTTAAGAGATGGATCCGTTGTTGCTGTGAAGAGTATCAGTAAAACTAGTTGCAAGTCTGATGAAGCTGAGTTTATGAAGGGTTTGAACATGTTGACATCACTGAGGAATGATAATGTAGTGAGGTTGAGAGGATTTTGTTGTTCAAGGGGACGAGGTGAATGCTTTCTGATTTATGATTTTGTTGCTAATGGAAACCTTTCACGCTTCCTTGATGCTAAGGGAGGAGATGGAGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGTATGGCATATTTACATGCATACAAAGCAAACAAACCCGTTTTGGTTCACCAAAACATCTCTGCTGACAAAATTCTCATTGATCAGCGTTACAATCCATTGCTGGCGGATTCTGGTCTGTACAAGCTTCTTACTAATGATATTGTTTTCTCTGCACTCAAGGGTAGTGCAGCAAAGGGTTACCTGGCTCCTGAATATGCCACTACTGGCCGGTTTGCTGAGACAAGTGATGTTTATGCTTTTGGGGTGGTGCTTTTCCAGATCCTTTCAGGAAAGCATGAGATCACTAGCTCAATAAGGCTTGCTGCTGAGTCCTCCAAATTCCAAGAATTTATTGACCCAAATCTCAATGGAAGATTCTTTGAATATGAAGCAGCTAAGCTGGCAAAAATAGCTTTGCTTTGCTCCCACGAGTCTCCTTTTGAGAGGCCATCCATGGAAACCATTGTTCAAGAACTGGTGAATTGTAGTAGCTGTCTCTGA 2037 0.4232 MGFSALLLLFPLVFLLSNPTWVCGNEELRALMDMKASLDPESRYLPSWTINGDPCDGSFEGVACNEKGQVANVSLQGKGLLGKLSPAIAGLNHLTGLYLHYNSLYGEIPREIANLTYLVDLYLNVNNLTGEIPREIASMENLQVLQLCYNQLTGSIPIQLGALKNLRVVALQSNHLTGAIPASLGDLGVLVRLDLSSNNLFGSIPTSLADAPSLKVLDVHNNTLSGNVPPVLKRLDDGFLYEYNLGLCGVGFSSLKACNASDHVNSSRPEPYGAATRDIPETANVKLPCNGTQCLNSSKSNQSTTSITVGIFVVIIALSAIGILTFTLYRRRKQKVGGSFHITDGHQSTDEAMCAYKKNGSPLVSLEYSSGWDPLADSRTFNGYSQDIFQSLRFNLDEVESATQYFSELNLLGKNCYSATYKGVLRDGSVVAVKSISKTSCKSDEAEFMKGLNMLTSLRNDNVVRLRGFCCSRGRGECFLIYDFVANGNLSRFLDAKGGDGEVLEWSTRVSIVKGIAKGMAYLHAYKANKPVLVHQNISADKILIDQRYNPLLADSGLYKLLTNDIVFSALKGSAAKGYLAPEYATTGRFAETSDVYAFGVVLFQILSGKHEITSSIRLAAESSKFQEFIDPNLNGRFFEYEAAKLAKIALLCSHESPFERPSMETIVQELVNCSSCL 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01698 678 Gene3D Ribonuclease Inhibitor 23 173 IPR032675 -
Cca02g01698 678 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 6 675 - -
Cca02g01698 678 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Cca02g01698 678 SUPERFAMILY Protein kinase-like (PK-like) 384 672 IPR011009 -
Cca02g01698 678 Gene3D Phosphorylase Kinase; domain 1 377 484 - -
Cca02g01698 678 SUPERFAMILY L domain-like 23 233 - -
Cca02g01698 678 ProSiteProfiles Protein kinase domain profile. 406 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01698 678 Pfam Protein tyrosine and serine/threonine kinase 411 671 IPR001245 GO:0004672|GO:0006468
Cca02g01698 678 Gene3D Ribonuclease Inhibitor 174 238 IPR032675 -
Cca02g01698 678 CDD TM_EGFR-like 300 335 - -
Cca02g01698 678 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Cca02g01698 678 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 675 - -
Cca02g01698 678 Gene3D Transferase(Phosphotransferase) domain 1 485 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01698 Cca-Chr2 35938291 35941653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01698 8 519 Miscellaneous Gene Families AT4G22730 54.943 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Cca02g01698 PK_Tyr_Ser-Thr 6.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01698 - - gmx:100775422 1206.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00510 08 8233836 8237897 Cca02g01698 02 35938291 35941653 PCT