Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01687 ATGTTGTACAAGTCATCTGTGAGGCCTTTAAGGATTGTCATGACTAATTTGCTTACAGTATTGTTGCTAATTGATGTGTTTGCATATGGCTTCAGATACGGAGTAGATGGCTTAAACATGAACTACTACTTGATGAGTTGTCCTTTTGTTGAACCCGTTGTTAAGAACATTGTCAACAGGGCTTTCCAGAATGATCCAACACTTGCAGCTGCTCTAATTAGAATGCACTTTCATGACTGCTTCATTGAGGGATGTGATGGCTCAGTTCTGATTGACTCCACTAAGGATAACACAGCAGAAAAAGATTCCCCAGGGAATTTGAGCCTAAGAGGCTACGAAGTCATTGATGATATCAAAGAAGAGATTGAAAGGCAATGCCCTGGCGTGGTTTCATGTGCTGATATTCTTGCCATGGCTGCTAGGGATGCAGTTTTCTTTACTGGAGGGCCAGTGTATGACATACCTAAAGGAAGAAAGGATGGAAGAAGGTCCAAAATTGAGGATACTATCAATTTGCCATTCCCTACTTTCAATGCCTCTGAGCTCATTAGGTCATTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCCGGGGCTCATACACTAGGAGTGGCAAGGTGTGCTTCTTTCAAGAACCGATTGAGCCAAGTGGATCCAAATTTGGACACAGAATTTGCCAAGACATTGGCTAAAACATGCAATTCTGGCGACAATGCAGAGCAGCCATTCGATTACACGAGGAACGATTTTGACAACGTTTACTTCAACGCCTTGTTGAGGAAAAATGGGGTTCTTGCATCAGACCAAACACTCTACACTAGCCCCAAAACTAGGAACTTTGTGAATGCTTATGCATTCAACCAAGCCATGTTCTTCTTTGATTTTCAACAAGCAATGGTGAAGATGGGTCTGCTTGATGTCAAAGACAATTCCAATGGCGAAGTCCGAGAAAATTGCCGCAAAATAAACTGA 981 0.4261 MLYKSSVRPLRIVMTNLLTVLLLIDVFAYGFRYGVDGLNMNYYLMSCPFVEPVVKNIVNRAFQNDPTLAAALIRMHFHDCFIEGCDGSVLIDSTKDNTAEKDSPGNLSLRGYEVIDDIKEEIERQCPGVVSCADILAMAARDAVFFTGGPVYDIPKGRKDGRRSKIEDTINLPFPTFNASELIRSFGQRGFSAQEMVALSGAHTLGVARCASFKNRLSQVDPNLDTEFAKTLAKTCNSGDNAEQPFDYTRNDFDNVYFNALLRKNGVLASDQTLYTSPKTRNFVNAYAFNQAMFFFDFQQAMVKMGLLDVKDNSNGEVRENCRKIN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01687 326 SUPERFAMILY Heme-dependent peroxidases 37 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 ProSiteProfiles Plant heme peroxidase family profile. 37 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Cca02g01687 326 Gene3D Peroxidase, domain 2 173 305 - -
Cca02g01687 326 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 CDD secretory_peroxidase 37 325 IPR033905 GO:0004601|GO:0042744
Cca02g01687 326 ProSitePatterns Peroxidases active site signature. 69 80 IPR019794 GO:0004601
Cca02g01687 326 PANTHER PEROXIDASE 25-RELATED 31 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca02g01687 326 PANTHER PEROXIDASE 47 31 324 - -
Cca02g01687 326 Gene3D - 41 326 - -
Cca02g01687 326 Pfam Peroxidase 54 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01687 Cca-Chr2 35822211 35824954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01687 11 326 Peroxidase AT4G33420 70.570 9.96e-168 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01687 K00430 - gmx:100776019 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00482 08 7885901 7889794 Cca02g01687 02 35822211 35824954 PCT