Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01684 ATGAGCTTTTGTGCGGCACTGAGCTTCACCAGGCAGACAGTTCAAGAAGACAAGGCTCTTATCTATGAGGACTGGAAGGAGAATATTCTTCCCCTATTGGAGGTAGCACCTTCTAAACTAAACCCAAAATTCTTTGGTATAGAACAATACTTTGCAGCGAAAAGTCTTATATCTTCACGATCTTTTGAGATTGATGATTACCATGGTTTTGGCATGGTTCCCCTGGCAGATCTATTCAATCATAAAACAGGTGCAGAGGATGTGCATTTCACTGCTATGTCCTCTAATTACGAATCTGATACTGATGTTGATGGTTGTAACAATGATGAAGGCATTGTTGAGGAAGAAGCATTGGCTCAAAATTCCTCTATAGATATGACTGTGTTAAATACTGCTAATGTTGAGAACTGTGTTGTTAGTGACATAGAGAGTTCTTTAGTCAGTGAGGGTGATACTTCTATGCTGGAGATGATTATGATAAAAAATGTCAGCGGTGGGGTTGAGGTATTTAATACTTATGGGCTATTGGGTAATGCTGCTTTGCTTCACAGATATGGATTTACTGAGCAAGATAATTCCTATGATATAGTAAACATAGACATGGAACTGGTAATTCAATGGTGTTCTACCGCGTTCTCTGACCGGCACTGTAGAGCAAGAGTCTCCCTTTGGAGAAGGTTAGGCTATTCTGCCTGTGGAATCCAAAACTCTGAATATTTTGAGATCTCATTTGATGGGGAGCCACAAATTGAACTCCTCAATTTATTACAGATCATGTTATTACCAGATACTGCTTACCATAGGTTAGACCTATCGGTATCAGTTTCTGGAAATTGTCATGAATCAAATGGAGCCAGTACCACCCTTCTGAATGACAATATAATTCCTAATAAAGCCTTTGATATGAGCAAGAAATCTTTGCTGCCTAAAAATGTTTGTGGTGCCCTGTTGTCACTTGCTGATATGAGGGAGAGTCTCTATGGTTCAAAATCAATTGAAGATGATATTGAGGCATTGGGAAGGTGTAGTTTAGTTAGAGAGAAAAAGCTGTACCATTCTTTGATGCTGCGGATCAATGAAAGGAAGGTCCTTCAAAAGCTCAGAAATTATGCTTCACAGCCTTTTAAAGTCACTAACCAGAGTTTACCGAGGAAGAAGTTGAAAAGGACAACAAAGAAATCGAGttga 1188 0.3923 MSFCAALSFTRQTVQEDKALIYEDWKENILPLLEVAPSKLNPKFFGIEQYFAAKSLISSRSFEIDDYHGFGMVPLADLFNHKTGAEDVHFTAMSSNYESDTDVDGCNNDEGIVEEEALAQNSSIDMTVLNTANVENCVVSDIESSLVSEGDTSMLEMIMIKNVSGGVEVFNTYGLLGNAALLHRYGFTEQDNSYDIVNIDMELVIQWCSTAFSDRHCRARVSLWRRLGYSACGIQNSEYFEISFDGEPQIELLNLLQIMLLPDTAYHRLDLSVSVSGNCHESNGASTTLLNDNIIPNKAFDMSKKSLLPKNVCGALLSLADMRESLYGSKSIEDDIEALGRCSLVREKKLYHSLMLRINERKVLQKLRNYASQPFKVTNQSLPRKKLKRTTKKSS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01684 395 PANTHER RIBOSOMAL LYSINE N-METHYLTRANSFERASE 3 14 367 - -
Cca02g01684 395 Gene3D set domain protein methyltransferase, domain 1 5 187 - -
Cca02g01684 395 SUPERFAMILY SET domain 130 193 IPR046341 -
Cca02g01684 395 SUPERFAMILY SET domain 13 91 IPR046341 -
Cca02g01684 395 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 14 367 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01684 14 394 NAC Transcription Factor Family AT3G56570 50.244 1.54e-121 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01684 - K05302 gmx:100794971 609.372