Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01660 ATGTCCAATCTCTCAAGTCATAAAAGAATGTTGGTGCTTCTCTTGCTTCTCTTGGTCCAAATCCAAGCCAAGGTGTTTTGCTACCAACACAAAGTTGGAGATCTAGAAGCTTGGGGGATACCCACCTCAGCAAATCCTCAAGTCTACACCAAATGGTCCAAAGATCACAATATCACAATTGGAGACTCACTTTTGTTTCTATACCCACCAAGTCAAGATTCAGTGATTCAAGTCACAGAGGAATCCTACAAGAGGTGCAACCTTAAAGACCCCATATTGTATATGAACAATGGAAACTCTTTGTTTAACATTACATCAAAGGGACAATTCTACTTCACTAGTGGTGTGGCTGGCCATTGCCAAAAGAATCAAAAGCTTCATATATCAGTGGGTGAAGGAATAATAGAAAATATGGATGCAGCATCTGGTCCAAGTTCTGCATATGCACCTTCCTATCCCACAGTATTTGGcaacattccagtctctaattctacctcaacttcaacctcacctcacctcacttcaactTTTCAATTCCTCATCATTGGATTTGTGATATGTGCACTGTTCTCCACCATAATGTGA 585 0.3641 MSNLSSHKRMLVLLLLLLVQIQAKVFCYQHKVGDLEAWGIPTSANPQVYTKWSKDHNITIGDSLLFLYPPSQDSVIQVTEESYKRCNLKDPILYMNNGNSLFNITSKGQFYFTSGVAGHCQKNQKLHISVGEGIIENMDAASGPSSAYAPSYPTVFGNIPVSNSTSTSTSPHLTSTFQFLIIGFVICALFSTIM 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01660 194 PANTHER MAVICYANIN 5 190 - -
Cca02g01660 194 ProSiteProfiles Phytocyanin domain profile. 28 132 IPR003245 GO:0009055
Cca02g01660 194 Gene3D - 28 140 IPR008972 -
Cca02g01660 194 SUPERFAMILY Cupredoxins 27 130 IPR008972 -
Cca02g01660 194 Pfam Plastocyanin-like domain 45 123 IPR003245 GO:0009055
Cca02g01660 194 PANTHER BLUE COPPER PROTEIN 5 190 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01660 Cca-Chr2 35526244 35527312 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01660 1 161 Phytocyanin Superfamily AT1G64640 56.098 4.24e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01660 - - gmx:100527517 312.768