Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01659 ATGGGAAGCCGAAGCTACTCGGCCAACCCGAGCGACTACAAGCTTCTGGAAGAAGTAGGGTACGGAGCGAGCGCCACCGTGTACCGCGGAATCTACCTGCCATACAACGAGGAGGTGGCGGTCAAGTGTCTGGATCTGGATCGATGCAACAGCAATCTGGAGGACATAAGGAGGGAGGCGCAGACCATGAGCCTCATCGAGCACCCCAACGTCGTCAAGGCCTTCTGCTCCTTCGTCGTCCACAGGAGCCTCTGGGTCGTCATGGGCTTCATGGCGCAGGGCTCCTGCCTCCACCTCATGAAGGCCGCCTATCCCGAGGGATTCGAGGAGGACGCCATCGGATCTATCCTCAAGGAGACTCTCAAGGCGCTCGACTATCTCCACCGACACGGCCACATTCACCGCGATGTTAAGGCTGGCAATATTCTTCTCGATTCCAACGGCCAGGTCAAGCTCGCCGACTTCGGCGTCTCCGCTTGCATGTTCGACACCGGCGACCGCCAGCGCTCCAGGAACACCTTCGTCGGCACCCCCTGCTGGATGGCGCCCGAGGTTCTGCAACCTGGCACCGGTTATAATTTCAAgGCGGATATTTGGTCTTTCGGAATTACGGCGTTGGAGTTGGCTCATGGACACGCGCCTTTCTCCAAGTATCCTCCTATGAAGGTTCTTCTAATGACCATTCAGAATGCTCCCCCGGGGCTTGATTATGATCGTGACAGAAAGTTCTCCAAGTCTTTTAAGGAAATGGTTGCCATGTGCCTGGTAAAAGATCAAACAAAGAGGCCGTCTGTGGAGAAGTTGCTCAAACACTCCTTCTTCAAGCAAGCTAAGCCTCCAGAGCTTTCTGTAAAGAAATTATTTGCTGATTTACCGCCTCTGTGGAACCGTGTAAAATCCCTCCAGCTTAAAGATGCAGCTCAGCTGGCACTAAAGAAAATGCCTTCTGCAGAACAAGAAGCAATATCTCAAAGTGAATATCAGCGAGGAGTTAGTGCGTGGAACTTCGATGTTGATGATTTGAAAGCTCAAGCTTCGTTGATGCAGGATGATGATGATATTGCAGAGATGAGGGAAGAAGATGAAAACAAATTCTTTAGCTATTATAAGGATACAACTGATTCCCAGTTTATTATGGACAAAAAGAATTCAAATAACTTGCAACAAGATGAGTTCGTGGCACCAGTAGGTAGTAGTGACATACCACAGAGTGAGAAGAGAAATGGATCAGTTGCTGAAGCAACACCATCTACTTCAGAGAAGGACGCGGGAACAAGCAAAGTTAAAACTCAATCAGGGAAACTTGGTAAAACCCAAAGTGGACCACTGGTGCCAGGCTCAGTGCTTGGTCTTTCTTTACCTGAAAGAGGGCGTGCATTTGAAAGGTTTGAGAATGAAAATCAGTTCTCAGGTGAGAAAAATAATCGTGATATACGACGAGCTCCAAGCTTCAGTGGTCCATTAATGCTTCCAAACCGAGCTTCAGCAAATAGTTTGTCAGCTCCGATAAAATCTTCTGGAGGATTCAGAGATTCCATGGATGATAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGTCGATTCTCAGTGACATCAGAAAATTTAGATCTGGTGAAGGATATTCCTGTAAGTTCAGTTTCACGCCGATCTTCACAGGGATCACCAATGAGGAAATCTGCCAGCGTTGGTGATTGGATGGTGGATTACAAACAAATGCCAATTGGTCAGCCCTCCAATGATTCTGCCAATATGAATATTCCTGCATCTATTTTAGTGCCTCATCTTCACAATCTTTTCCAGCAGACATCTATTCAACAGGATCTTATAATGAATCTGTTGAATAGTTTGCAAACTGCCGAGGCAATTGATGCTTCTCAGAATGGAAAGTTGCCACCATTACCTCGCAATTCAGAGAACAATGGAAGTGTTGATACAGCAGCTTCAGAGAGGGAAACTATGCTGCTGGCCAGAATTTCAGAACTCCAGTCTCGGATGATTAATTTGACTGATGAGCTGACGTATGAGAAGTTAAGATACGGGCAGTTGCAACAACAGCTATCTGGTTTCTACAGCCAGGAACAAAATGGGGAGAGAGACGAATTTGCATGA 2109 0.4723 MGSRSYSANPSDYKLLEEVGYGASATVYRGIYLPYNEEVAVKCLDLDRCNSNLEDIRREAQTMSLIEHPNVVKAFCSFVVHRSLWVVMGFMAQGSCLHLMKAAYPEGFEEDAIGSILKETLKALDYLHRHGHIHRDVKAGNILLDSNGQVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPSVEKLLKHSFFKQAKPPELSVKKLFADLPPLWNRVKSLQLKDAAQLALKKMPSAEQEAISQSEYQRGVSAWNFDVDDLKAQASLMQDDDDIAEMREEDENKFFSYYKDTTDSQFIMDKKNSNNLQQDEFVAPVGSSDIPQSEKRNGSVAEATPSTSEKDAGTSKVKTQSGKLGKTQSGPLVPGSVLGLSLPERGRAFERFENENQFSGEKNNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSMDDKSKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSSQGSPMRKSASVGDWMVDYKQMPIGQPSNDSANMNIPASILVPHLHNLFQQTSIQQDLIMNLLNSLQTAEAIDASQNGKLPPLPRNSENNGSVDTAASERETMLLARISELQSRMINLTDELTYEKLRYGQLQQQLSGFYSQEQNGERDEFA 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01659 702 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Cca02g01659 702 Gene3D Transferase(Phosphotransferase) domain 1 94 325 - -
Cca02g01659 702 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 2 695 - -
Cca02g01659 702 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01659 702 SUPERFAMILY Protein kinase-like (PK-like) 11 329 IPR011009 -
Cca02g01659 702 CDD STKc_OSR1_SPAK 11 274 - -
Cca02g01659 702 SMART serkin_6 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01659 702 MobiDBLite consensus disorder prediction 401 438 - -
Cca02g01659 702 MobiDBLite consensus disorder prediction 396 447 - -
Cca02g01659 702 Pfam Protein kinase domain 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01659 702 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 695 - -
Cca02g01659 702 MobiDBLite consensus disorder prediction 626 645 - -
Cca02g01659 702 Gene3D Phosphorylase Kinase; domain 1 3 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01659 Cca-Chr2 35515410 35524387 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01659 6 694 MAP Kinase Kinase Kinase Kinase AT4G10730 65.903 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Cca02g01659 Pkinase 1.8e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01659 - - gmx:100783699 1279.62