Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01654 ATGAAAGGCGGGCGATCGCACCGCCCTCAGAGCTCGGACCCGCCGGACGAGTGGGTGGACGGCTCGTGGACCGTGGACTGCATCTGCGGCGTCACGTTCGACGACGGAGAGGAAATGGTTAAGTGCGACGAGTGCGGCGTGTGGGTCCACACGCGCTGCTCGCGCTACGTCAAGGGCGACGACACCTTCGCGTGCGACAAGTGCAAGGCGAAGCACCACACGAACATCGAGGAGAACGAGCTCGCGCAGTTCCTGGTTGAGCTCCCAACGAAGACGATATCGATCGATAACAAGAAGGCCCTCCCCTCTCGGCCCAGGCTGTGGACGGAGAAGCCCATTGAGGAGCGGGTCCATGTCCAAGGCCCACCCGCTGGCGAGCCTTCACTATTCGCCAACACTTCCACCTCCTCGATCTTCTCTCCTCAGCTGTGGAAAGCCTCCGGGTATGTTCCTAAGAAGTTCAATTTTCAGTACAGAGAGTTCCCTTTCTGGGGTgatagcgatagtgataacgttgataacgctgataacgttgataacgataacgataaagataaagaGGGTGATCAAGAGGGTTCTCTAGCACAGCCACAAGTGCAAGAACGGGATTATAATAATGATAATGTggctgaggctgaggctgaggctgaggctggggctCTTGTGTCTCTGGCCAAAGACACTGCGAATACTGCTCCTCCTGTATTGGACTCACCTGTGGAGGCTTTGGTAGATTCTAGATCTGGCCATGGTAAGGATTTGGACTCGGGCAAGTTTGGGAGCGGGGATACGCTGCCACGTGTCCACAGTTCCGTGAAGAAGGAGAGGGCTATGCTGAGGCCTCCGGTTGTTCATAACAGCAAGCGCCGGAAGGAGGATTCCGGGGCTTCGAATTCCAAAGACCGGAGTGGGAAGAAGCGGTCCAGGACTTCCTCTGACAGAGAGGCGGATCCCAAGAGGAGAACTCAGCATTCTTCTAAAACAGGTGAGGGAAAACAATTGGACTTTTATGGGGACAGAGGTCCGAAGGTTTTCAAGGCTGATGCTCGGAGCATAAAGAACAAAAACTTAAAAGACATAGCGGCTCAAGAACATGTTTCTGATGATTATTTACCTGTGGATACTGTCGTGGAGGAGCCAAATAACAACTTGACAACTACTGAGGACTCTTCAGAACCGTTAAATCCTGTCATGTCTAGACCTAGTCTTTCTGTTGGAGATGTAGTAGCAGAAGAGAAGGCTAGTCATAAAGCTCCTACTTTGGCGGAGATGTCTTCTAAGACTGATGATGCTGTTACATCGGCTTTAAAGCATAATTATGTTGGAAATGCTTCAGCTAAAGAAAAGGATGGAGATTGCTTGGCATCTGATAATGTAGATGATACTTTAGTAGTAAGAAGTGCTGTGAGTCCTCATACAGAAGGTCATTGTGGTTCTACACCAGAACTTATGGATATCCAAGTTTCTCAAGATCATGACTGTAACATGGGTTCTAGCTCTGCAAAATGCAAAGTTAAGGTGAAGAGAGAGGATGATGTTGATAAGTTTAGAAAGCCCCCAAATTTTCATTCTTCTCCTGTCAGTGATCTTAAAAGCAATGAAAAATCATCTGATGACACATCTGATACTGTTAAAGTGAATGATGCTCCAGTTCCCTGTTTACTATCATGTGAAAATAAGGTGGGTAGTGTTGACATTTCATCAGATGTAATCCCTGCTGATCATACCAATAAGCCCAATGAATTATCTGGTGATTTTTGTCATAGAAAACAAGAACTGGAGGGGTCTGAAGGTTCCTTGGAAACACAAAAGGGATTTTCAGAAACCAAAGATAGTTCAGATGCTGTTAAAGATCCATCAAAATCTGAAGCACCTGGATGTCTGCCTAAAGTGTTAGCATGTGTTGGAAAATCATCTCCAACTTTGTCAACCACGAACTCTAGACGATTGGATCATGACATCAAATCTGAAGATACTGAAACCCCTAAATCTTTTACGAAGCATGGAGTGATGACTGATGGTAACATTCACATAAAGAATGAAACTTGTACAAATAATGCTGCCAGGGATGACAATCCAAAGAAGTCTGTAAGAGAGCGACCAAAATCTTCTTTGAATTCCAATTCAAAAGGATTGCATTCAAGCAGGAGTGTGCCAAATTCTGTCTCAAAGCAAGTCATTCCAGACGTGAGAGATTCTGTTCATGTTTCGTCTTCTAAACCATTGACACATCAGACTGCAAATATCTTAGGCTCTAGTGATTCTAATGCATCTTTGCACCATCAGAAGGTTTTACAAGTGCAGAATAAGATTTCAAACCAAACTAACATCCACACTTCCTCAAAGTTGACCCAAAGTCATGGGTCATCAGTGAATCCTTCCCCAATAACAAATTCATTGCTGACTGACGAAGAGCTTGCTCTGCTCTTGCATCAAGAACTGAATAGTTCGCCTCGTGTACCTCGTGTACCCCGAGCACGGCAAGCAGGTAGTTTGCCACAGTTGAGTTCTGCAAGTGCTACAAGCACGCTAATGAGCCGAAAATCTGCCGGAGGAAAGGACCATTATTTGGCATCTAAACGAAAACACAAGGATGCTTCTAGAGATGGGTCTAGCAGTTTGCGGGAACTTGAAGGTGAAGCTAAAAGGATAGAGAAGGAGAAAGGTCCATCCTCCTCTGATCAGAGGAAACAAGATATGCCATATGTGGAAGATGCTCCTGCAGGGGAAGAAAGCCTTGCATCTATGACAGCTGCGAACTCCATTGCTAGCAATACTGTTTCTCCCACTTCTGCAATTGCAAACAGTGATCCATCCTCCCCTCCTGAGGATCAGAATTTGTCATCTATGCATAACTCGCCCAGGAATATATCTGATGATGATACAACAACTGCTGGAAGGCCAGTTCATCGCACCTTACCTGGTTTAATCAATGAAATTATGAGCACAGGGAAGCGCATGACATATGTGGAACTCTGTAATGCTGTGCTACCGCACTGGCATAACTTGAGGAAGCATAATGGAGAGCGGTATGCATACTCAAGTCACTCTCAGGCTGTTCTTGATTGTTTGAGGAACCGGCATGAATGGGCAAGATTGGTTGATCGGGGTCCAAAGACAAATTCTAATAGGAAAAGGCGTAAGTTGGATGCTGAAGAATCTGATGATAATGGATATGGCAAGGGAAGAAGTGCAAAAGAGGTTGAAGTGAAGAACTTTGAGTTGCAAAAAGAAGAGTACCCTAAAGGCAAACGTAAAGCTCGAAAGCGCAGGCGCCTTGCTCTTCAGGGAAGAGCAGTGAAGGATGTCAGGAGGAGACAAAAAGCTGGCTCGCAATCGGATGAGGATGTTGGTCCATTCTCCAATTCTAGTGAAGAGAGCATGTTCAGTGAAGATGATATTCAGGTTGGCAGAATATGTCCTGCTGGAAGATCATCAGATGAGACAGGTAGTGCCTAA 3459 0.4469 MKGGRSHRPQSSDPPDEWVDGSWTVDCICGVTFDDGEEMVKCDECGVWVHTRCSRYVKGDDTFACDKCKAKHHTNIEENELAQFLVELPTKTISIDNKKALPSRPRLWTEKPIEERVHVQGPPAGEPSLFANTSTSSIFSPQLWKASGYVPKKFNFQYREFPFWGDSDSDNVDNADNVDNDNDKDKEGDQEGSLAQPQVQERDYNNDNVAEAEAEAEAGALVSLAKDTANTAPPVLDSPVEALVDSRSGHGKDLDSGKFGSGDTLPRVHSSVKKERAMLRPPVVHNSKRRKEDSGASNSKDRSGKKRSRTSSDREADPKRRTQHSSKTGEGKQLDFYGDRGPKVFKADARSIKNKNLKDIAAQEHVSDDYLPVDTVVEEPNNNLTTTEDSSEPLNPVMSRPSLSVGDVVAEEKASHKAPTLAEMSSKTDDAVTSALKHNYVGNASAKEKDGDCLASDNVDDTLVVRSAVSPHTEGHCGSTPELMDIQVSQDHDCNMGSSSAKCKVKVKREDDVDKFRKPPNFHSSPVSDLKSNEKSSDDTSDTVKVNDAPVPCLLSCENKVGSVDISSDVIPADHTNKPNELSGDFCHRKQELEGSEGSLETQKGFSETKDSSDAVKDPSKSEAPGCLPKVLACVGKSSPTLSTTNSRRLDHDIKSEDTETPKSFTKHGVMTDGNIHIKNETCTNNAARDDNPKKSVRERPKSSLNSNSKGLHSSRSVPNSVSKQVIPDVRDSVHVSSSKPLTHQTANILGSSDSNASLHHQKVLQVQNKISNQTNIHTSSKLTQSHGSSVNPSPITNSLLTDEELALLLHQELNSSPRVPRVPRARQAGSLPQLSSASATSTLMSRKSAGGKDHYLASKRKHKDASRDGSSSLRELEGEAKRIEKEKGPSSSDQRKQDMPYVEDAPAGEESLASMTAANSIASNTVSPTSAIANSDPSSPPEDQNLSSMHNSPRNISDDDTTTAGRPVHRTLPGLINEIMSTGKRMTYVELCNAVLPHWHNLRKHNGERYAYSSHSQAVLDCLRNRHEWARLVDRGPKTNSNRKRRKLDAEESDDNGYGKGRSAKEVEVKNFELQKEEYPKGKRKARKRRRLALQGRAVKDVRRRQKAGSQSDEDVGPFSNSSEESMFSEDDIQVGRICPAGRSSDETGSA 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01654 1152 MobiDBLite consensus disorder prediction 702 727 - -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 853 904 - -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 1114 1130 - -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 928 963 - -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 165 204 - -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 818 909 - -
Cca02g01654 1152 ProSitePatterns Zinc finger PHD-type signature. 27 68 IPR019786 -
Cca02g01654 1152 PANTHER UNCHARACTERIZED 1 1148 - -
Cca02g01654 1152 SMART PHD_3 26 69 IPR001965 -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 648 664 - -
Cca02g01654 1152 SUPERFAMILY FYVE/PHD zinc finger 15 73 IPR011011 -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 1035 1065 - -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 1096 1112 - -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 1078 1152 - -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 638 740 - -
Cca02g01654 1152 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 76 IPR013083 -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 177 191 - -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 514 545 - -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 594 624 - -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 381 401 - -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 928 970 - -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 243 341 - -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 830 848 - -
Cca02g01654 1152 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SET-26-RELATED 1 1148 - -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 268 341 - -
Cca02g01654 1152 MobiDBLite consensus disorder prediction 381 398 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01654 25 68 PHD Transcription Factor Family AT5G22260 44.681 3.59e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01654 - - gmx:100810855 1684.46