Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01636 ATGTTCAAATTCTTGAAAGAGGTGGTGGGTGGATCTGGCACCGGCCTCAAAGATCTCCCATACAACATCGGCGAACCTTACTCTTCTGCTTGGGGCTCTTGGCTTCATTTTCGCGGCACCTCCAAGGACGATGGTTCTCCCGTGTCAATATTTTCTCTGTCTGGGAGCAATGCTCAGGATGGACATTTAGCTGCAGGGCGTAATGGCGTTAAGCGTCTTCGCAATGTTAGGCATCCGAATATTTTGTCATTTCTGCACAGCACCGAGATTGGAACCGTTGACGCTGGTTCTCCCAAGGTTACAATTTATATGGTGACTGAGCCCGTGGTGCCGCTGTTGGACAAGATTAGCGAGTTAGGTCTTGAAGGTACACAAAGGGATGAATATTATGCCTGGGGCCTGCATCAAATAGCAAAAGCTGTGAGCTTCTTAAATAATGATTGTAAGCTTGTTCATGGTAATGTTTGCTTGGCTAGTGTTGTTGTCACACAAACTTCGGACTGGAAACTCCATGCTTTTGATGTTCTATCAGAGTGTGATGGGAGTAATGAAACTTCCTCTGGGCAAATGCTGcaatatgcatggcttgttggagcacaatacaaatcaatggaactagcaaaatctgactgggctgcaattaagaagtctcctccatgggctattgattcttggggcatggGTTGTCTAATCAATGAGCTTTTCTCTGGTATGAAGTTGGGCAAAACAGAAGAGTTACGCAACACTGTCTCCATTCCCAAGTCTCTGCTTCCAGATTATCAGCGGCTACTGAGTTCCATGCCCTCTCGTAGATTAAACACTTCAAAGCTTATAGAAAATGAGTTTTTTCAAAATAAATTGGTAGACACAATTCATTTCATGGAAATTCTTAGTTTGAAAGATAGTGTTGAGAAAGACACCTTCTTCCGCAAGCTTCCAAATTTGACAGAGCAGCTTCCTCAGCAGATTGTGTTGAAAAAGTTACTTCCTTTATTAGCTTCTGCACTTGAATTTGGTTCAGCTTCTGCCCCAGCTTTGACTGCATTGTTGAAAATGGGTTCCAGACTTTCAGCTGAGGAGTTCCATATCAAGGTGCTTCCAACAATTGTTAAACTTTTTGCATCCAACGACCGAGCTATTCGAGTTGGTCTTCTTCAACATATTGATCAATACGGGGAGTCATTATCTGCACAAGTTGTTGATGAGCAGGTTTACCCTCATATTGCTACTGGGTTCTCTGATACATCTGCTTTTTTGAGGGAACTTACTCTCAAATCCATGCTAATTTTGGCTCCAAAGCTGTCCCAAAGGACCTTTTCAGGGTCATTGTTAAAGCATTTGTCAAGGTTACAGGTTGATGAAGAACCAGCTATTCGGACAAATACTACCATCTTATTGGGAAATGTTGCAAGCTACTTAAATGAAGGGACAAGAAGAAGAGTGTTGATTAATGCATTTACAGTCCGTGCTTTACGTGATACCTTTCCACCTGCCAGAGGAGCAGGCATTATGGCTTTATGTGCCACCAGTTCCTACTATGACATCACTGAAATTGCAACTCGTATTCTTCCTAATATTGTTGTACTCACAATTGATCCCGACAGTGATGTTCGATCTAAGGCATTTCAAGCTGTTGATCAATTTTTGCAGATGGCAAAGCAATATTATGAAAAGACAAATACAGCAGAGGCTACTGAGGGTACAGCCATGGGAATCTCTTCAATTCCAGGAAATGCTGGTTTACTTGGATGGGCTATGAGCTCCTTGACTCTGAAGAGTAAACCTTCGGATCATGCTCCAGTTGCTTCTGTGAGTTCTAGTGCACTTACTCCAACATCTTCTAATCCCAGCTCAGTTGTAGATATTCCTTCAACAGTGCCTGTTCGCGTAAGCTCCACAACAGATTTTGCTGAACCCCCTGCCCCCACATCCCCAACATCAACAGATGGCTGGGGTGAACTTGAGAATGGGCTTGACGAGGAGCGTGAAAATGACAAGGATGGGTGGGATGATCTGGAACCACTTGAAGAAATAAAACCAACTCCAGCTCTTGCAAACATTCAAGCAGCTCAAAGGCAGCCAATTTCTCAACCTGTTTCGCAGAAGAAACAAGTCTCAAATTTGCGATCCAAAAGTACACCAAAGTTGAGCAAGGATGAAGATGATGATTTGTGGGGTTCCATAGCAGCTGCTGCTCCAAAAACATCAAAAGCTTTAAACATGAAGTCAAATGTGACTGATGAAGATGATCCTTGGGCTGCCATTGCTGCTCCTGCACCCACTACTAAGGTCAGGCCCTTAGCTGGCAGAGGGCGGGGTGCTAAACCTGCTGCTCCAAAGCTAGGTGCTCAGCGGATAAACCGGACATCATCGTCCGGGCTGTAA 2385 0.421 MFKFLKEVVGGSGTGLKDLPYNIGEPYSSAWGSWLHFRGTSKDDGSPVSIFSLSGSNAQDGHLAAGRNGVKRLRNVRHPNILSFLHSTEIGTVDAGSPKVTIYMVTEPVVPLLDKISELGLEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTSDWKLHAFDVLSECDGSNETSSGQMLQYAWLVGAQYKSMELAKSDWAAIKKSPPWAIDSWGMGCLINELFSGMKLGKTEELRNTVSIPKSLLPDYQRLLSSMPSRRLNTSKLIENEFFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLTEQLPQQIVLKKLLPLLASALEFGSASAPALTALLKMGSRLSAEEFHIKVLPTIVKLFASNDRAIRVGLLQHIDQYGESLSAQVVDEQVYPHIATGFSDTSAFLRELTLKSMLILAPKLSQRTFSGSLLKHLSRLQVDEEPAIRTNTTILLGNVASYLNEGTRRRVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEIATRILPNIVVLTIDPDSDVRSKAFQAVDQFLQMAKQYYEKTNTAEATEGTAMGISSIPGNAGLLGWAMSSLTLKSKPSDHAPVASVSSSALTPTSSNPSSVVDIPSTVPVRVSSTTDFAEPPAPTSPTSTDGWGELENGLDEERENDKDGWDDLEPLEEIKPTPALANIQAAQRQPISQPVSQKKQVSNLRSKSTPKLSKDEDDDLWGSIAAAAPKTSKALNMKSNVTDEDDPWAAIAAPAPTTKVRPLAGRGRGAKPAAPKLGAQRINRTSSSGL 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01636 794 PANTHER - 1 791 - -
Cca02g01636 794 MobiDBLite consensus disorder prediction 688 712 - -
Cca02g01636 794 MobiDBLite consensus disorder prediction 688 722 - -
Cca02g01636 794 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Cca02g01636 794 ProSiteProfiles Protein kinase domain profile. 2 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01636 794 MobiDBLite consensus disorder prediction 751 794 - -
Cca02g01636 794 SUPERFAMILY Protein kinase-like (PK-like) 37 289 IPR011009 -
Cca02g01636 794 MobiDBLite consensus disorder prediction 655 673 - -
Cca02g01636 794 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 1 791 - -
Cca02g01636 794 SUPERFAMILY ARM repeat 292 550 IPR016024 -
Cca02g01636 794 Gene3D - 281 560 IPR011989 -
Cca02g01636 794 MobiDBLite consensus disorder prediction 595 651 - -
Cca02g01636 794 Gene3D Transferase(Phosphotransferase) domain 1 115 279 - -
Cca02g01636 794 MobiDBLite consensus disorder prediction 595 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01636 Cca-Chr2 35159013 35170159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01636 70 290 MAP Kinase Kinase Kinase AT5G66850 25.532 2.94e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01636 K08876 - gmx:100792884 1331.24