Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01618 ATGCTTTTTGCCGATGCAGAAGCGATTCACCTTTTGCTGAGTCCGTTATCCCCCGGCACGCCTTCCGTGGAGCTCGAGCTCCACGAGGACTTGATCACAACTCTCCTAAACCTCTCAATTCACGACGACAACAAAAGAGCGTTAGCTAAAAACGAAAAAGTGGTTTCCCTGATTGTTGATTCGTTGAAAATGGGAACAGTCCAAACAAGAAGCAATGCAACTGCAGAGGTGTTTTCAATGTCATCTATTTACTCAAACAGACACATACTTGGAAAATCTGAAGCTATAAAGTATCTAGTGGACTTGCTAGACGAGGGGCATCCTTTAAGCATGAATGACGCTGCTTCAGCTTTGTTCAAATTGTGTTTGGCCTGTGAGAATAAAGCGAGGACTGTGAGAGAGGGTGCAGTGCAGGTTATTCTTGGAAAGATTGTTGACAAGGTCATGGTTGATGAGTTGGTGTCACTACTTGTGTTGCTCGCTAAGCATTCCAAGGCTGTTGAGGCATTGGTGAGTCATGGTGTTGTACTCTACTTGCTTGATATCGTCAAGGAAACCACGTCAGAACGCGTCAAGGAAAATTGTGTTGGGATTCTGTGCACGCGCTTCCTGAGCACTCAACCCTTTACCTCCAAGAACTCTCCCCTAGCACACTGCCCCCAAAGGACTCAGCCCTTTCAAAGGGCTCAGTCATTTCTCAAAGCGCTCAGCTGTTTCCAACGGCTCTTCCCTTTACCTCTAGGGAGTGCTCCCCTTGCACGCTGCCCCCAAAGGGCTCAGCCCTTTATGACAGAACCCACTTGTTCTTCACCATTTTCACCCAAAACTAGACATGCAAGCTTACCCAATTCACACGAAGTGTTGAGTGTTTCTGCACGTACCGCTCTCGCCACCGATAGGAGAGGAGCTTACATATTCAAGAATATGGGTATTATTGGGAGAATGAGAAGGCCTCTTGAAGACCATCATCTTCTCCTTATGGCTTTCTTTGTTGCCATCCTTCTACAAAGGGCTGTGGTTGAATCAGGTGCGCTAAATGACACAAGGTATAGGCACACCAGTAGCCTGAGACTTGAAAGGATTAAAAGGCACTTGGAGAAGATCAATAAGCCTCCTGTGCTCACCATAGAGAGTCCAGATGGAGATCTTATTGATTGTGTTGACGAAAGAAAACAACTGGCTTTTGATCACCCCCTTTTAAAGAATCACAAGATCCAGAAAATGCCAACGGAGATGCCTGGAGGGATGAAGGTGGAGAGAGATACTAGTGATATGGAAGGTGAAGGAATATCGCAAATGTGGCACCTAAATGGTACACGGTGTCCGAAGGGAACGGTTCCCATACGCCGAACCACAGTGCAAGACGTGTTGAGAGCAAAGTCTTTGTATCACTTTGGCAAAAAACGCTCACGAGTTTCCCTCTCTCGCCGCAATGATGCCCTAGATATTCTCGGCAACAATGGCCATGAGTATGCGGTCGCATACACTGAATCATCGCAAAACATATTCGGGGCAAAGGCAACAATAAATGTATGGGATCCATCAATTCAGGTGAGGGGCGAGTTTAGTCTATCACAAATTTGGGTCCTTTCAGGAGCCTTCGAAGGTCCTGATCTTAATAGCATCGAAGCTGGATGGCAGGTCAGTCCGAAGCTCTATGGTGACAACAGACCCAGATTGTTCAGTTATTGGACGAGAGACACGTATCGTTCAACCGGATGCTACAACCTTCTTTGTGCTGGTTTTGTTCAAAAGGATGCTAGGATATCCATTGGAGCTGCCATTTCTCCTCTCTCTTCTTATGCTGGCAAGCAATACGACATTAGCATCCTGGTTTGGAAGGATCCAAAAGAAGGGAACTGGTGGATGAGTTTTGGCGCGAACACATTGATAGGGTATTGGCCCAAAGAGCTATTCACAAACTTAGCGGATCACGCGACGGCAGTGGAGTGGGGAGGAGAGGTTGTGAACACAAGAACCAATGGGCAACACACGTTTACCCAAATGGGGTCTGGACACTTCGCAGAGGAAGGTTTCGGAAAAGCAAGCTACTTCCGGAACCTTCAGCTCGTAGACAGCAATAACAAGCTGATTCAAGCGCAGGACGTCTCAACCTTGGCCCCCAACTCAAACTGCTATAACATCAAGATGGACAACAGCAACGATTGGGGGACCTTCTTCTTCTATGGTGGGCCCGGGAACAATCCTAAATGCCCATGA 2220 0.4721 MLFADAEAIHLLLSPLSPGTPSVELELHEDLITTLLNLSIHDDNKRALAKNEKVVSLIVDSLKMGTVQTRSNATAEVFSMSSIYSNRHILGKSEAIKYLVDLLDEGHPLSMNDAASALFKLCLACENKARTVREGAVQVILGKIVDKVMVDELVSLLVLLAKHSKAVEALVSHGVVLYLLDIVKETTSERVKENCVGILCTRFLSTQPFTSKNSPLAHCPQRTQPFQRAQSFLKALSCFQRLFPLPLGSAPLARCPQRAQPFMTEPTCSSPFSPKTRHASLPNSHEVLSVSARTALATDRRGAYIFKNMGIIGRMRRPLEDHHLLLMAFFVAILLQRAVVESGALNDTRYRHTSSLRLERIKRHLEKINKPPVLTIESPDGDLIDCVDERKQLAFDHPLLKNHKIQKMPTEMPGGMKVERDTSDMEGEGISQMWHLNGTRCPKGTVPIRRTTVQDVLRAKSLYHFGKKRSRVSLSRRNDALDILGNNGHEYAVAYTESSQNIFGAKATINVWDPSIQVRGEFSLSQIWVLSGAFEGPDLNSIEAGWQVSPKLYGDNRPRLFSYWTRDTYRSTGCYNLLCAGFVQKDARISIGAAISPLSSYAGKQYDISILVWKDPKEGNWWMSFGANTLIGYWPKELFTNLADHATAVEWGGEVVNTRTNGQHTFTQMGSGHFAEEGFGKASYFRNLQLVDSNNKLIQAQDVSTLAPNSNCYNIKMDNSNDWGTFFFYGGPGNNPKCP 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01618 739 Pfam Neprosin activation peptide 375 495 IPR025521 -
Cca02g01618 739 Gene3D - 510 629 - -
Cca02g01618 739 Gene3D - 1 224 IPR011989 -
Cca02g01618 739 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 321 737 - -
Cca02g01618 739 SUPERFAMILY ARM repeat 3 201 IPR016024 -
Cca02g01618 739 PANTHER CARBOXYL-TERMINAL PEPTIDASE 321 737 - -
Cca02g01618 739 Pfam Neprosin 520 732 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01618 Cca-Chr2 34970148 34987751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01618 2 201 U-box Gene Family AT3G07360 47.525 1.15e-49 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01618 - - gmx:100808774 711.449