Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01605 ATGTGCGAAGCCCTAAAAAGCCACTACGAGCTGTGCGAGGAGATCGGTGGCGGTCGTTTCGGCACCATCTTCCGGTGCTTCCACCCTCTCACCAACCAACCCTTCGCCTGCAAACACATCGTCAAGTCCCACCTCCAAGACTCCACCGACCGCGACTGCCTCCAAAACGAACCCAAATTCATGACTCTGCTCTCTCCGCACCCCAACATCCTCCAAATCTACCATGTCTTCGAAGACCAAGATTCTCTCTCCATCGTCATGGACCTCTGCCAGCCCCACACGCTCTTCGACCGCATCGTCGACAACCCCGTCCCGGAGGCCGAGGCCGCCGTCATCATGAAGAGCCTTCTGGAAGGGGTGGCGCACTGCCACCGCCTCGGCGTGGCCCACCGCGACATAAAGCCGGACAATGTTTTGTTCGACGCGGCGGGGAATCTGAAGCTGGCGGACTTCGGGTCGGCGGAGTGGTTCGGCGACGGGAGGAGCATGGGCGGCGTGGTGGGGACGCCGTACTACGTGGCGCCGGAGGTTCTGTTGGGGAGGGAGTACGACGAGAAGGTGGATGTGTGGAGTTGCGGTGTGATTATGTATATAATGTTGGCGGGGATTCCTCCTTTTTATGGTGACTCTGCTGTGGAGATCTTTGAGGCTGTTGTTAGGGGTAATCTTAGGTTTCCTTCTAGAATCTTCCGGAACGTTTCTTCCTCTGCCAAGGATCTCTTGAGGAAAATGATCTCTAGGGATGCTTCCAGAAGGTTCTCGGCGGAACAAGCCCTCCGCCACCCTTGGATCTTGAGTGTGGGAGAGACATGA 813 0.572 MCEALKSHYELCEEIGGGRFGTIFRCFHPLTNQPFACKHIVKSHLQDSTDRDCLQNEPKFMTLLSPHPNILQIYHVFEDQDSLSIVMDLCQPHTLFDRIVDNPVPEAEAAVIMKSLLEGVAHCHRLGVAHRDIKPDNVLFDAAGNLKLADFGSAEWFGDGRSMGGVVGTPYYVAPEVLLGREYDEKVDVWSCGVIMYIMLAGIPPFYGDSAVEIFEAVVRGNLRFPSRIFRNVSSSAKDLLRKMISRDASRRFSAEQALRHPWILSVGET 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01605 270 PIRSF ILK 10 260 - -
Cca02g01605 270 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 270 - -
Cca02g01605 270 Gene3D Transferase(Phosphotransferase) domain 1 93 270 - -
Cca02g01605 270 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01605 270 CDD STKc_CAMK 8 263 - -
Cca02g01605 270 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01605 270 SUPERFAMILY Protein kinase-like (PK-like) 5 266 IPR011009 -
Cca02g01605 270 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Cca02g01605 270 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Cca02g01605 270 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Cca02g01605 270 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 3 270 - -
Cca02g01605 270 Pfam Protein kinase domain 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01605 Cca-Chr2 34810298 34811748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01605 3 269 EF-hand Containing Proteins AT1G61950 41.912 3.63e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Cca02g01605 Pkinase 8.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01605 - K08794 gmx:548089 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g03081 03 52287960 52289194 Cca02g01605 02 34810298 34811748 ECH
Cca02g01605 02 34810298 34811748 Cca02g01605 02 34810298 34811748 ECH