Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01555 ATGGCGTCGAAGGACCAGAAAACGCGCCTCTACCATCCCTACCAGGACCTCAACGTTCCCATCCAAAACCTCTACAACCTCCCCACCGCGCCGGACCACCTCTTCCCCGAGGAAGCCGCCAGGACCCACCGCTCCTGGGGCGACAACCTCCAGTACTACACCGGCACCGGCTACCTCTCCGGCGCCCTCATCGGCGCCGCCAGAGGCACCGCCCAGGGCCTCCGCGAGGCCGAACCCGCTGACTCCCTCAAGCTCCGTCTCAACCGAGTCCTCAACTCGGGGGGCCACGCGGGCCGCAGACTCGGCAACTCGCTCGGCGTCTTGGGCCTCATCTTCGCGGGCCTCGAGAGCGGGATGATCCATTTTAGAGCCACCGATGACTTAGTCAACAGCGCCGTCGCCGGACTCGGCACCGGTGCGCTCTACAGGGCCGCCGCTATTGCCGGCGCCATCGGCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCCCCCCCGCCGCTGCGGTTGCCGGGAAGCAGGCTTTGAAGAGATACGTGCCGATCTAGGAAGCCATGGATTAGGTTATCGACAATGGGGATGGTGGTACAAATTAGATTAA 672 0.5506 MASKDQKTRLYHPYQDLNVPIQNLYNLPTAPDHLFPEEAARTHRSWGDNLQYYTGTGYLSGALIGAARGTAQGLREAEPADSLKLRLNRVLNSGGHAGRRLGNSLGVLGLIFAGLESGMIHFRATDDLVNSAVAGLGTGALYRAAAIAGAIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPRRCGCREAGFEEIRADLGSHGLGYRQWGWWYKLD 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01555 223 Pfam Tim17/Tim22/Tim23/Pmp24 family 52 152 - -
Cca02g01555 223 PANTHER TIM23 4 154 IPR045238 GO:0022857
Cca02g01555 223 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 4 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01555 Cca-Chr2 34195378 34196049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01555 5 145 Chloroplast and Mitochondria Gene Families AT1G17530 55.245 1.73e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01555 K17794 - gmx:100803835 252.292