Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01544 ATGGCATCCGATCTAAACGACGCCGTTTTCCCCGAAGAAGATCTcgacgacgacgaggacgagactcaagaggaagaagaggaggacgacgaagacgacgacgttttaggcgagcccgacgacgacgaAACCGAGCCCCCTCCCTCCGTCCTCGCCGCCGCGCCCCTTTCCGCCGCCTCCCAAGCCCTCGACACCGCGTCAATTCCGACCTCCGCCGACGATTCCTCGCCGAAACGACAGCGGACAGAGCAAGTCGAGGAGAAGAAGGCGCTGGACGATTCTCGGCGGCTGTTCCAGCGTCTGTGGACGGACGAGGACGAGATCGGGCTTCTGCAGGGGTTTCTGGAGTACACGGCGCAGCGAGGATCCTCTCACCACAACGACACCGCGTTGTTCTACGACCAGATCAAGTCGAAGCTTCAACTCGGTTTCAACAAGAACCAGCTCGTGGAGAAGCTCCGCAGGCTGAAGAAGAAGTATCGCAACGTCGTCGGCAAACTCGGCTCCGGCAAGGAGTTCTCCTTCAAGAGCCCTCACGACAGAGCCACCTTCGAAATCTCGCGGAGGATCTGGAGCAACACCGCTCCAGTCGCCGCTCCCGAAGACGACGACGAAATCAACCCTAACCCTAATTTCGGTCATTCCGTGAAGACGCCGCTGTCGCGGAAGCGGTCGCGGCCTCGACCGGAGAAGCGCGAGTTGAACGATAGGGGTTGTGATCGAAGAGACGGTAAGGAGTTGTTTGACGCCGGTGCTGAAGGAGTTCGTGGGATTGGTAAGAGGGTTTGGAGTTGGAGCATTGAATCCCTTGCCAATGCCTTTGATTTTATTGAATTTGGGGATTGGGGAAATGGCGATGGATGA 864 0.522 MASDLNDAVFPEEDLDDDEDETQEEEEEDDEDDDVLGEPDDDETEPPPSVLAAAPLSAASQALDTASIPTSADDSSPKRQRTEQVEEKKALDDSRRLFQRLWTDEDEIGLLQGFLEYTAQRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKYRNVVGKLGSGKEFSFKSPHDRATFEISRRIWSNTAPVAAPEDDDEINPNPNFGHSVKTPLSRKRSRPRPEKRELNDRGCDRRDGKELFDAGAEGVRGIGKRVWSWSIESLANAFDFIEFGDWGNGDG 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01544 287 MobiDBLite consensus disorder prediction 60 75 - -
Cca02g01544 287 Pfam Protein of unknown function, DUF573 98 192 IPR007592 GO:0006355
Cca02g01544 287 PANTHER BNAANNG10740D PROTEIN-RELATED 1 217 IPR007592 GO:0006355
Cca02g01544 287 MobiDBLite consensus disorder prediction 1 89 - -
Cca02g01544 287 PANTHER BNAANNG10740D PROTEIN 1 217 - -
Cca02g01544 287 Coils Coil 146 166 - -
Cca02g01544 287 MobiDBLite consensus disorder prediction 226 245 - -
Cca02g01544 287 MobiDBLite consensus disorder prediction 9 45 - -
Cca02g01544 287 MobiDBLite consensus disorder prediction 198 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01544 Cca-Chr2 34076017 34076954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01544 1 247 GeBP Transcription Factor Family AT5G28040 41.667 5.88e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Cca02g01544 DUF573 2.5e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01544 - - gmx:100817182 302.367