Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01538 ATGGTTGACGGAGTTGGCTTGATTCGTTTCTTATCTACCGTGGCGGAGATAGCACGGGGAGCGAAACAACCTTCGATTCAAGCCGAGTGGCGCAGGGAGCTTTTAAACGCGAGAGATCCACCACGTGTCACGTTTAACCACCGCGAGTACGAACAACTATCAGACTCCAACGACGTCGTTCCCACGGACTTGGAACAACGTTCGTTCTTCTTCGGAGCCACCGAAATAGCCGCCATCCGCAGCCTGCTTCCCAGCGACCTCGAGCAACACGCCACGACGTTCGAGGTGCTGACATCATACGTGTGGCGCTGCCGCACGAGAGCGCTGCAAATCGATCCAGAGGAAGACGTCCGAATGATGTGCATCGTGGACGCGCGCGGCAAGTTCAACCCTCCCTTCCCGGCGGGGTATTACGGCAGCTGCTTCGCGTTCCCGGCGGCGGTGAGCGGCGCCGGAGAGCTGTGCGAGAAGCCGCTAGAGTACGCGGTGGGGCTGGTACAAAAAGCGAGGGAGAAAGTGAGCGAGGAATACATGCAGTCAGTGGCGGATCTAATGGTGAGTGAGGGACGACCGTTGTTCACGGTGGTGCGGTCGTGTCTTGTGTTGGATACAACTGAAGCTGGGTTTAGGGATGTGGATTTTGGGTGGGGGAAGGCCGTGTATGGTGGGATGGCTATTGCTGGCGCTGGGGCTTTTCCTGCTGTGAACTTTCACGTGCCGAGTCAGAATGCAAAGGGAGAAGAAGGTATACTGGTTTTGGTTTGCTTGCCTAAGCAAGTTACCAAAGCCTTTGCCAAAGAGTTGGATCACAACATGCTTCACCCTTGA 828 0.5604 MVDGVGLIRFLSTVAEIARGAKQPSIQAEWRRELLNARDPPRVTFNHREYEQLSDSNDVVPTDLEQRSFFFGATEIAAIRSLLPSDLEQHATTFEVLTSYVWRCRTRALQIDPEEDVRMMCIVDARGKFNPPFPAGYYGSCFAFPAAVSGAGELCEKPLEYAVGLVQKAREKVSEEYMQSVADLMVSEGRPLFTVVRSCLVLDTTEAGFRDVDFGWGKAVYGGMAIAGAGAFPAVNFHVPSQNAKGEEGILVLVCLPKQVTKAFAKELDHNMLHP 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01538 275 Gene3D - 1 52 IPR023213 -
Cca02g01538 275 Gene3D - 59 268 IPR023213 -
Cca02g01538 275 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 272 - -
Cca02g01538 275 Pfam Transferase family 1 269 - -
Cca02g01538 275 PANTHER BENZYL ALCOHOL O-BENZOYLTRANSFERASE 1 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01538 Cca-Chr2 33998091 33998918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01538 3 268 Monolignol Biosynthesis Gene Families AT5G48930 25.887 2.25e-24 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01538 K19861 - gmx:100820325 465.692