Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01525 ATGGAGTGCAACAAGGACGAGGCTGTGAGGGCTAGGCAAATTGCGGAAGCTAGAATGCAAAGAGGCGAATTTGTAGAGGCACTCAGGTTTGCTACCAAGGCCAAAAAATTGTATTCTGAGGTTGAAAACATTACCCAGATTTTTACCATTTGCGAGGTTCACAATGCTGCACAGAAGAAAGTCTCTGCCTCTGAAATGGACTGGTATGCAATTCTCCAGATTGAAAGGTTGGCTGATGAGGCAACCATAAAGAAACAGTACAGGAGGCTTGCACTGCTGCTTCATCCTGACAAGAATAAATTTGCTGGTGCAGAAGCCGCTTTCAAGTTGATTGGGCAAGCCAATGGGGTGTTGAGTGACCAAGCAAAACGTTCTTTCTATGACAACAAGTTTGGAGCATCTGTAAGAGGTGTCGCGCCTCAGTCTTCATGCCGTTACTCAAATGTGAATGTGTCTGCTGCAAAACATGATGCAAACGCTACAAATTGTCAGAAGAAATTTGATTCACAACATTACTCAAGTGCGAATGTGTCTGCTGCAAAACATGATGCAAATGCTACAAATTGTAAGAAGAAAGTTGATTCACAACATTACTCAAATGTGAATGTGTCTGCTGCAAAACATGATGCAAACGCTACAAATTGTCAGAAGAAATTTGATTCACAACATTACTCAAGTGCGAATGTGTCTGCTGCAAAACATGATGCAAATGCAACAAATTGTAAGAAGAAATTTGATTCACACCATTACTCAAATGTGAATGTGTCTGCTGCAAAACATGATGCAAATGCTACAAATTGTCAGAAGAAAGTTGATTCACACCATTACTCAAATGTGAATGTGTCTGCTGCAAAACATGATGCAAATGCTACAAATTGTCAGAAGAAATTTGATTCACAACATTACTCAAATGCGAATGTGTCTGCTGCAAAATATGATGCAAATGCAACAAATTGTAAGAAGAAATTTGATTCACAACATTACTCAAATGTGAATGTGTCTGCTACAAAACATGATGCAAATGCTACAAATTGTAAGAAGAAAGTTGATTCACAACATTACTCAAATGTGAATGTGTCTGCTGCAAAACATGATGCAAATGCTACAAATTGTCAGAAGAAATTTGATTCACAACATTACTCAAATGTGAATGTGTCTGCTGCAAAACATGATGCAAATGCAACAAATTGTCAGAAGAAATTTGATTCACACCATTACTCAAATGTGAAAATGTCTGCTGCAAAACATGATGCAAATGCTTCAAATTATCAGAAGGATTCTTGTCGGAAATCCACCTGTTCCAACAAGCAAGTTAAACAGAAGACATTCTGGACGTCTTGCCAACATTGTAATACCAGGTACCATTACTGCATAGCATTTGTAAATGCAACCTTACGCTGTCAAAAGTGTTTCAAGTCCTTTAAAGCTCGTGTCCAGAAAGAGGCTTCAATGCATGGTTCCTCAAAACCAGTTTCAGAAAGTACTGGTGGAAATCCTGTATATATGAAAAAATGTGCAGCTGGAGTTGATGGTCATCGTAAAGGTGAAAAGGGTAAATATGGCTGTGTTTCTGCATCCAAAGACATGGAATCGCAGACCTCTAAAAAAGTTGGGAGTAAAAGAGTAAAGCAGTCAGCATCAGATTCAGGAAAAAACTTCAAAGCTAAACATGGTGATGAGATGAAAGATGCCTATGTTAGAGAAAATGGTGTTGATCCGTCCAAAGTTAATGCAAGGAGATCTTCCAGGATTAAGCAGCGTGAGGATTTTGAAATTCCTTCCAAAAAGCCACGACAAAATTGA 1803 0.3871 MECNKDEAVRARQIAEARMQRGEFVEALRFATKAKKLYSEVENITQIFTICEVHNAAQKKVSASEMDWYAILQIERLADEATIKKQYRRLALLLHPDKNKFAGAEAAFKLIGQANGVLSDQAKRSFYDNKFGASVRGVAPQSSCRYSNVNVSAAKHDANATNCQKKFDSQHYSSANVSAAKHDANATNCKKKVDSQHYSNVNVSAAKHDANATNCQKKFDSQHYSSANVSAAKHDANATNCKKKFDSHHYSNVNVSAAKHDANATNCQKKVDSHHYSNVNVSAAKHDANATNCQKKFDSQHYSNANVSAAKYDANATNCKKKFDSQHYSNVNVSATKHDANATNCKKKVDSQHYSNVNVSAAKHDANATNCQKKFDSQHYSNVNVSAAKHDANATNCQKKFDSHHYSNVKMSAAKHDANASNYQKDSCRKSTCSNKQVKQKTFWTSCQHCNTRYHYCIAFVNATLRCQKCFKSFKARVQKEASMHGSSKPVSESTGGNPVYMKKCAAGVDGHRKGEKGKYGCVSASKDMESQTSKKVGSKRVKQSASDSGKNFKAKHGDEMKDAYVRENGVDPSKVNARRSSRIKQREDFEIPSKKPRQN 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01525 600 PANTHER - 1 196 - -
Cca02g01525 600 PANTHER - 386 600 - -
Cca02g01525 600 SMART dnaj_3 66 123 IPR001623 -
Cca02g01525 600 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 386 600 - -
Cca02g01525 600 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 196 - -
Cca02g01525 600 PRINTS DnaJ domain signature 69 87 IPR001623 -
Cca02g01525 600 PRINTS DnaJ domain signature 87 102 IPR001623 -
Cca02g01525 600 PRINTS DnaJ domain signature 103 123 IPR001623 -
Cca02g01525 600 CDD DnaJ 67 120 IPR001623 -
Cca02g01525 600 MobiDBLite consensus disorder prediction 578 600 - -
Cca02g01525 600 MobiDBLite consensus disorder prediction 531 600 - -
Cca02g01525 600 MobiDBLite consensus disorder prediction 550 569 - -
Cca02g01525 600 SUPERFAMILY Chaperone J-domain 62 131 IPR036869 -
Cca02g01525 600 MobiDBLite consensus disorder prediction 531 549 - -
Cca02g01525 600 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Cca02g01525 600 Gene3D DnaJ domain 50 138 IPR036869 -
Cca02g01525 600 Pfam DnaJ domain 67 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01525 Cca-Chr2 33822198 33824313 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01525 4 129 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 39.394 1.63e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01525 - - ccaj:109790324 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02986 03 51305431 51310810 Cca02g01525 02 33822198 33824313 PCT