Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01509 ATGGCTTTGTTACCGTCACCACTCCATTTTTCAACTTCGTATCTTAGCACAAGCACTGTTGTGGCTCTCTGTGTATTCTTCTCACTCCTTTGCGTTTGCATCATCATTGGCCATCTTCTGGAAGAGAATCGGTGGGCTAATGAATCCATTGTTGCCCTTCTTCTGGGTTTGTGTGCTGGAACGGTGGTGTTGATGGTGACCAAATTTAATAGTACCAAGATTTTAATATTCAGTGAAGACTTATTCTTTCTTTACTTGCTTCCCCCAATCATTTTCAATGCCGGTTTCCAAGTCAAGAAGAAACAGTTCTTCAAGAATTTCACAACTATACTGCTCTTTGGAGTCATTGGAACAGTAATTTCATTCTGTCTGATATCTGTAGGTGCCCTTCTGCTCATTCAGAGGATTGGCATATCTAACCTTGGTATAAAAGATTACCTAGCCATTGGTGCCATATTGTCAGCAACGGACTCAGTTTGTACATTGCAGGTTCTGAATCAAGATGAAACTCCATTCCTTTACAGCATTGTATTTGGGGAGGGAGTAGTAAATGATGCTACGTCTATTGTTCTTTTCAATTCGGTACAATCGCTTGACTTCAGCAGCATCGATACTATTACAGCCTTGAAATTGTTGGGGACTTTCCTTTACCTCTTCTGCACTAGTACTGCCCTTGGCATACTAGTTGGCCTTTTGAGTGCTTATATTATTAAAACACTTTACCTTGGAAGGCATTCTACTGATCGTGAAGTTGCACTTATGATGTTGATGGCATATTTGTCATATATCATTGCTGAGCTTTTAAGTCTCAGTGGGATTTTGACTATTTTCTTCTGTGGCATTGTTATGTCACACTATACTTGGCACAATGTTACAGGAAGTTCAAGGACAACAACCAGGCACTCCTTTGCAACCATCTCATTCATTTGTGAAACCTTTATATTTATATCTGTTGGCATGGATGCTTTAGACATTGACCAATGGAAAAAAAGCAAAGCTAGTGCAGGAACTTCAGTTGCTGTGAGTTCAACGTTGTTTGCATTAGTGTTGATTGGAAGAGCAGCTTTTGTGTTCCCTATTGCAAATATTACAAATTGCATAAAGAGAAGAGAGAGTTCCAAAATTGAGTTTCGTTCACAGTTTATCATATGGTGGGCAGGCCTGATGAGAGGTGCAGTGACTATTGCTCTGTCTTATAACCAGTTTGCTCAAGCTAGGAGATCATCAACTCAAGACTCTTCACTAATGATCACCTCTACTATAATCGTGGTCTTATTCAGTACTGTGGTATTTGGTTCCATTACAAAGCCTCTGATTGAGGCTGTGCAACCAAGGCATTTAAAACCATCCATTTTTGACTCCACTGATATTCCAGAAGATTTGAGACTCCAATTGCTAGAAAACAATGTTCCAATTATTCAAAGGCGAAGTAGGCTAAGTTTGCTAATGAGTTATCCAACCACAACTGTTCACTACTTTTGGAGGAAATTTGATGATAAGGTCATGAGACCTGTATTTGGTGGAAGGGGTTTTGTTCCATCTGTTCCTGCCTCATCATCTGCTGAATCAGAGGAGATTTCTTGA 1584 0.3984 MALLPSPLHFSTSYLSTSTVVALCVFFSLLCVCIIIGHLLEENRWANESIVALLLGLCAGTVVLMVTKFNSTKILIFSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFTTILLFGVIGTVISFCLISVGALLLIQRIGISNLGIKDYLAIGAILSATDSVCTLQVLNQDETPFLYSIVFGEGVVNDATSIVLFNSVQSLDFSSIDTITALKLLGTFLYLFCTSTALGILVGLLSAYIIKTLYLGRHSTDREVALMMLMAYLSYIIAELLSLSGILTIFFCGIVMSHYTWHNVTGSSRTTTRHSFATISFICETFIFISVGMDALDIDQWKKSKASAGTSVAVSSTLFALVLIGRAAFVFPIANITNCIKRRESSKIEFRSQFIIWWAGLMRGAVTIALSYNQFAQARRSSTQDSSLMITSTIIVVLFSTVVFGSITKPLIEAVQPRHLKPSIFDSTDIPEDLRLQLLENNVPIIQRRSRLSLLMSYPTTTVHYFWRKFDDKVMRPVFGGRGFVPSVPASSSAESEEIS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01509 527 Gene3D - 142 194 - -
Cca02g01509 527 PRINTS Na+/H+ exchanger signature 95 109 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cca02g01509 527 PRINTS Na+/H+ exchanger signature 110 118 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cca02g01509 527 PRINTS Na+/H+ exchanger signature 150 160 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cca02g01509 527 PRINTS Na+/H+ exchanger signature 81 92 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cca02g01509 527 PANTHER SODIUM/HYDROGEN EXCHANGER 9 525 IPR018422 GO:0006812|GO:0015299|GO:0016021
Cca02g01509 527 PANTHER SODIUM/HYDROGEN EXCHANGER 9 525 - -
Cca02g01509 527 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 22 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Cca02g01509 527 Pfam Sodium/hydrogen exchanger family 26 440 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01509 Cca-Chr2 33704856 33710018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01509 11 525 Antiporters AT3G05030 58.537 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01509 K14724 - tcc:18600351 766.148