Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01503 ATGTCAATCATGGATGTTAATACTACAACCACTGTACCTGCCGGGCCACCAACTAAGCACCATTCTTCTTACACACAGCATCACTTTCATTCACAAAAACATAACCATAGTAGTCATGGTCATTTCCCCTCCAAAGCCATTCTCATAACCATCGCATTGGTCACCTTAGTCACGGTCCTATTTATCATTTTTGTTGTCTTATTCTTGATCCGTCGCCAAAAGTCTTCCACTAAGAATGGAACTTGCAAAGAAGACAGCAGAGAGCTTCATGACACAAGCAGCAGGCTCATTACTTCAACAACGTTGAATTCTAGCCCAGATGTAAAGAGTGGGTGTCTTCATGGGGGAAATTTGAGCAGGACCCCAGCACCTAAATTTCGAGGAGTCCAAGTCTTCACCTATAGGGAGTTAGAAATTGCCACAGATGGATTCAACGAAGCAAATGTGATGGGTAGTAATGGAGGGCATGGCTTGATGTATAGAGGAGTTTTAAGGGATGGCACTTTGGCAGCAATTAAGTTGCTTCGAAGTGAGGGTAAGCAAGGGGAGCGTGCCTTCAGAATAGAGGTCGATCTCCTAAGTCGCTTGCACTCTCCTTATTTGGTGGAGTTACTTGGCTATTGTGCTGACCAACACCACAGGTTATTGATTTTTGAATACATGCCCAATGGTACACTCCACCACCATCTTCACTCTTCCAACGATCAAACTCAACCGTTGGATTGGTGGACCCGGATGAGGATAGCCCTTGATTGTGCCAGGGCGCTGGAATTCCTACATGAATATGGAGTCTCACCTGTGATCCATAGAGACTTCAAGAGTTACAACGTTCTACTGGATCAAAATTTTCGTGCCAAGGTGTCTGATTTTGGATTGGCTAAGATGGGATCAGAGAAGAGGAACGGTCAGGTTTCCACCCGTGTGTTGGGGACCACTGGATATCTGGCACCAGAGTATGCCACGGGTAAGCTAACTACAAAGTCAGATGTTTACAGCTATGGTGTGGTTCTTCTAGAACTGCTAACCGGACGTGTGCCAGTTGATATCAAGCGGGCCCCAGGAGAACACGTCCTTGTCTCTTGGGCTCTTCCAAGGTTGACAAACAGAGAAAAGGTGATTGAAATGGTTGACCCAGCTCTACGCGGACAGTATTCAAAGAAGGATTTAATTCAGATAGCTGCCATTGCAGCAATGTGCATACAGCCAGAAGCTGATTACAGGCCGCTCATGACAGATGTTGTACAATCACTGATACCACTTGTTAGGAACCAAACCTCTCTTAGTTCATCTAGCTCCCTACGATTTCAGAAACAAACGCCAAGTCCAAGTCATTAG 1335 0.4554 MSIMDVNTTTTVPAGPPTKHHSSYTQHHFHSQKHNHSSHGHFPSKAILITIALVTLVTVLFIIFVVLFLIRRQKSSTKNGTCKEDSRELHDTSSRLITSTTLNSSPDVKSGCLHGGNLSRTPAPKFRGVQVFTYRELEIATDGFNEANVMGSNGGHGLMYRGVLRDGTLAAIKLLRSEGKQGERAFRIEVDLLSRLHSPYLVELLGYCADQHHRLLIFEYMPNGTLHHHLHSSNDQTQPLDWWTRMRIALDCARALEFLHEYGVSPVIHRDFKSYNVLLDQNFRAKVSDFGLAKMGSEKRNGQVSTRVLGTTGYLAPEYATGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAPGEHVLVSWALPRLTNREKVIEMVDPALRGQYSKKDLIQIAAIAAMCIQPEADYRPLMTDVVQSLIPLVRNQTSLSSSSSLRFQKQTPSPSH 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01503 444 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 3 443 - -
Cca02g01503 444 MobiDBLite consensus disorder prediction 1 22 - -
Cca02g01503 444 Gene3D Transferase(Phosphotransferase) domain 1 221 438 - -
Cca02g01503 444 CDD STKc_IRAK 154 420 - -
Cca02g01503 444 PANTHER OS01G0750732 PROTEIN 3 443 - -
Cca02g01503 444 MobiDBLite consensus disorder prediction 78 92 - -
Cca02g01503 444 SUPERFAMILY Protein kinase-like (PK-like) 126 417 IPR011009 -
Cca02g01503 444 MobiDBLite consensus disorder prediction 1 38 - -
Cca02g01503 444 Pfam Protein tyrosine and serine/threonine kinase 154 417 IPR001245 GO:0004672|GO:0006468
Cca02g01503 444 MobiDBLite consensus disorder prediction 23 38 - -
Cca02g01503 444 MobiDBLite consensus disorder prediction 78 103 - -
Cca02g01503 444 Gene3D Phosphorylase Kinase; domain 1 117 220 - -
Cca02g01503 444 ProSiteProfiles Protein kinase domain profile. 145 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g01503 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01503 Cca-Chr2 33599689 33603083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01503 112 442 Receptor kinase-like Gene Family AT3G58690 61.947 4.69e-148 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Cca02g01503 PK_Tyr_Ser-Thr 6.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01503 - - gmx:100499645 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01503 02 33599689 33603083 Cca02g01503 02 33599689 33603083 ECH