Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01484 ATGACCGATCAATCCATTCAAATCAAAATGCTGGCTGAAAAATTCCACCGCTTCGTTCTTGACTGCGAACTGAAGCAGCAACCGCCAATCGCTCATCACCCAGATGATGAATCAAAGCAAGTAAACGAGAACTCCGACTCCATGGATGAAAACAGCATGTCCAATGGAATTCATGAAGCTTCTCCTGATAATGGTCACACACTTCCCATATTGAGGAAAATAATTGATCTGAGTATGAAATTTCAGGATTTGAAGAAGCAGCATATCGCCTTGTCTGATGAAGTGAAACTCAGTGCCGAATCTTTTCCCGGCACTGATGTTTTGAAGTCCGTGCAGCTTCTCGGTGATGAATATGAACTCTTGAAAAGAAAGTACCTGGAGGAGTCCTCAGAGCGTAGGCGGCTTTACAATGAAGTAATAGAACTCAAGGGAAACATCAGAGTTTTCTGCAGATGCAGACCATTAAATGAGAGTGAAATTTCTAATGGGACTGCATCTGTTGTCAATTTTGAGTCGTCTTTAGATAATGAGCTTCAAGTTATTTGCTCAGATTCTTCTAAGAAGCAATTTAAATTTGATCATGTATTTGGGCCGGAAGCTAACCAAGAAGCTGTTTTTCAGCAGACCAAACCCATTGTTACATCAGTATTGGATGGGTATAACGTCTGCATATTTGCCTATGGACAAACTGGAACTGGGAAAACGTTTACAATGGAGGGAACACCAGAACACAGGGGAGTTAACTACAGAACCCTGGAAGAACTGTTTCGGATAACTGAAGAGAGACATGGCACAATGAAGTATGAATTGTCTGTTAGCATGCTGGAGGTCTACAATGAGAAGATAAGAGATCTCTTGGTGGAAAATTCCACCCAACCCACTAAAAAATTGGAGATAAAGCAAGCTGCAGAAGGAACCCAAGAAATCCCAGGACTTGTTGAAGCTCGTGTTTATGGAACAGAAGATGTGTGGGGAATGCTTAAGACTGGAAACCAAGTCAGATCAGTTGGATCCACATGTGCTAATGAGCTTAGCAGCCGTTCTCATTGCTTGTTACGAGTAACTGTAATGGGAGAAAACTTGGTTAATGGCCAGAAAACAAAGAGTCACCTTTGGTTGGTAGACTTGGCTGGCAGTGAGCGTGTGGGAAAAACGGAAGCTGAGGGAGAAAGACTGAAGGAATCTCAATTTATAAACAAGTCTCTTTCAGCACTCGGTGATGTTATTTCTGCTTTAGCTTCAAAATCAGCCCATGTCCCTTACAGGAATTCAAAACTCACTCATATGCTGCAAAGCTCTTTAGGAGGAGACTGCAAAACACTAATGTTTGTGCAGGTAAGTCCGAGCGCCGCAGACTTGGGAGAGACACTTTGCTCACTGAATTTCGCCACCCGTGTCCGAGGAATTGAGAGTGGCCCAGCGCGCAAGCAAGTAGACCACACCGAGCTGATGAAGTACAAGCAAATGGCAGAAAAGCTAAAACAAGACGAAAAGGAAACGAAGAAATTACAGGATAACTTGCAAATCTTGCAACTCAGGCTTGCTGCAAGAGAACACCATTGTAGAACCCTTCAGGAAAAGGTTCGGGACCTGGAGAGCCAGATAGCAGAAGAAAGAAAAACTAGACTAAAGCAAGAAAGTAGATCTCTTGCTGCTGTTTCAGGTCAACCTTCATCATCATCACAACACACAACATCTCATAAGACCATGACAGACAAGAAGCCACCACTAAATCCTTCAAAACTGAGAATGCCACTGAGAAGAATAACCAATAACTCCTTGCCTCCACGGTCTCCTTTAAGATCAAAGAGTTACACAGCATTCATGAATGGAAAGGAAAACTCTGCTAGAAGGACCTCAATGCCAACAAATGCTGTGAGGCCAGCCGCGCCATCAACAACAACACAGTTCCTTCAGGCAAGGAGGCGGGTGTCCATTGCCGTGAAACCTCCTGCATCATCAACAACACAGGTCTTTCAGCCAAGAAGGAGAGTCTCCATTGCCACATTCCGCCCTGAGACCACATCTGACATGACAACTCCACTCCGTAGCTCCGCATTTCGAGTTACCAGTGGTAGCAGTCAACAGTCACTGATAAGAAGCCAAAGGAAAGATCGGTATTCAAGTTTGTTTGTTCCATTGCCAGCATCTGTGGAGACAACACCAATGTCTGTAAGGAGGAGTAGCAGTAAGTTTATGATGAGCAGTCCAACACAGGCAGATTCGCGGGTGGGATCCACTAGACATCCAGCTGTTCTTGCTCTTCAACGTAAACCTTTAATCTGGAGTCCTCTCAAGCTGAGAGGCGGCTTGAAAAATAACAGAAAGTCATCACTCTTGCCATATCGCCCAACCCATATGCATTAA 2367 0.4415 MTDQSIQIKMLAEKFHRFVLDCELKQQPPIAHHPDDESKQVNENSDSMDENSMSNGIHEASPDNGHTLPILRKIIDLSMKFQDLKKQHIALSDEVKLSAESFPGTDVLKSVQLLGDEYELLKRKYLEESSERRRLYNEVIELKGNIRVFCRCRPLNESEISNGTASVVNFESSLDNELQVICSDSSKKQFKFDHVFGPEANQEAVFQQTKPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRITEERHGTMKYELSVSMLEVYNEKIRDLLVENSTQPTKKLEIKQAAEGTQEIPGLVEARVYGTEDVWGMLKTGNQVRSVGSTCANELSSRSHCLLRVTVMGENLVNGQKTKSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHVPYRNSKLTHMLQSSLGGDCKTLMFVQVSPSAADLGETLCSLNFATRVRGIESGPARKQVDHTELMKYKQMAEKLKQDEKETKKLQDNLQILQLRLAAREHHCRTLQEKVRDLESQIAEERKTRLKQESRSLAAVSGQPSSSSQHTTSHKTMTDKKPPLNPSKLRMPLRRITNNSLPPRSPLRSKSYTAFMNGKENSARRTSMPTNAVRPAAPSTTTQFLQARRRVSIAVKPPASSTTQVFQPRRRVSIATFRPETTSDMTTPLRSSAFRVTSGSSQQSLIRSQRKDRYSSLFVPLPASVETTPMSVRRSSSKFMMSSPTQADSRVGSTRHPAVLALQRKPLIWSPLKLRGGLKNNRKSSLLPYRPTHMH 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01484 788 MobiDBLite consensus disorder prediction 28 44 - -
Cca02g01484 788 SMART kinesin_4 143 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca02g01484 788 MobiDBLite consensus disorder prediction 547 566 - -
Cca02g01484 788 ProSiteProfiles Kinesin motor domain profile. 145 469 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca02g01484 788 PANTHER KINESIN-RELATED 82 781 IPR027640 GO:0003777|GO:0007018
Cca02g01484 788 Pfam Kinesin motor domain 151 469 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca02g01484 788 PANTHER KINESIN-LIKE PROTEIN KIN-14S 82 781 - -
Cca02g01484 788 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 506 IPR027417 -
Cca02g01484 788 Coils Coil 483 548 - -
Cca02g01484 788 ProSitePatterns Kinesin motor domain signature. 369 380 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca02g01484 788 MobiDBLite consensus disorder prediction 614 633 - -
Cca02g01484 788 MobiDBLite consensus disorder prediction 540 603 - -
Cca02g01484 788 MobiDBLite consensus disorder prediction 585 603 - -
Cca02g01484 788 MobiDBLite consensus disorder prediction 45 61 - -
Cca02g01484 788 Gene3D Kinesin motor domain 140 512 IPR036961 -
Cca02g01484 788 CDD KISc_C_terminal 143 470 - -
Cca02g01484 788 MobiDBLite consensus disorder prediction 27 64 - -
Cca02g01484 788 PRINTS Kinesin heavy chain signature 219 240 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca02g01484 788 PRINTS Kinesin heavy chain signature 339 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca02g01484 788 PRINTS Kinesin heavy chain signature 370 388 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca02g01484 788 PRINTS Kinesin heavy chain signature 419 440 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01484 Cca-Chr2 33474539 33478839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01484 117 495 Calmodulin-binding Proteins AT5G65930 42.368 2.39e-81 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01484 K10406 - gmx:100788477 1301.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01484 02 33474539 33478839 Cca02g01484 02 33474539 33478839 ECH