Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01479 ATGGCTGATTTTTTGACCTCTACCCACCGAGCCAAGTGGATTTTCTCTCCTCAACAGCTGGATGAGAAATATAGAGCTGCTAATCAGAGAGCCAAACAAGTTCTAGAGAAGTGTGGAGCAACTCTAATGGAAGTCGATGTTGATGGGTCGTTGTCATATCTTGAACCCCAGATGACTGCAAAGGACGGTGCTGAAAAGCATTCTCGGACAAAACCTCTTAGTATTGAAGAAGAACAATGTATAAGGGTATTTTATGAAAACAAGTTACAAGAAGTATGTAACAATTTCCGCTTCCCTCATAAGATCCAGGCAACAGCCCTTATCTATTTTAAAAGATTCTATCTGCAATGGTCGGTGATGGAACATCAACCAAAACATATTATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAGAATCACGTGTCAGCTGAAGAGCTTGGTAAAGGGATTTCACAGGATCATCAAATGATTCTCAACAATGAGATGATAGTTTATCAGAGTTTGGAATTTGATCTTATTGTTTATGCACCATATCGCTCAGTTGAAGGTTTTATAAATGACATGGAGGAATTCTGCAATGCTGGTGATGATCAGCTTCAAATGCTCAAGACTTTGCAAAACACAGCAAGATCAGAAGTTGATAAAATGATGCTTACAGATGCACCACTTTTATTTCCTCCTGGGCAGTTGGCCTTGGCTGCTTTGCACAAGTCAAATGCACTCCATAAAGTCATTGACTTTGATAGTTATCTTGAGAGCATGTTTTCTCGCCAGAATTCCATGCACACAATATCCGAGCTTTCTGAATCACTGCATGGAATTGATTCTTTGGTTAGAAAATACAAAGTTCCTTCTGACAAGGAATTGAAGCATATCAACCGAAAACTAAAGTCTTGTTGGGGTCATAGCTCTCATGACGAGGGCAAGAAGAGGGAGAAGAAATCAAAGCACAAGTCCAAAAAGAGTTCAAATGAAGCACAAAATATGTCATCTCTTTTATAG 1008 0.3929 MADFLTSTHRAKWIFSPQQLDEKYRAANQRAKQVLEKCGATLMEVDVDGSLSYLEPQMTAKDGAEKHSRTKPLSIEEEQCIRVFYENKLQEVCNNFRFPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSVEGFINDMEEFCNAGDDQLQMLKTLQNTARSEVDKMMLTDAPLLFPPGQLALAALHKSNALHKVIDFDSYLESMFSRQNSMHTISELSESLHGIDSLVRKYKVPSDKELKHINRKLKSCWGHSSHDEGKKREKKSKHKSKKSSNEAQNMSSLL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01479 335 Pfam Cyclin, N-terminal domain 84 174 IPR006671 -
Cca02g01479 335 SUPERFAMILY Cyclin-like 179 305 IPR036915 -
Cca02g01479 335 SMART cyclin_7 87 168 IPR013763 -
Cca02g01479 335 Gene3D - 177 282 - -
Cca02g01479 335 PANTHER CYCLIN-H 1 330 - -
Cca02g01479 335 SUPERFAMILY Cyclin-like 66 176 IPR036915 -
Cca02g01479 335 CDD CYCLIN 82 148 IPR013763 -
Cca02g01479 335 Pfam Cyclin C-terminal domain 179 276 IPR031658 -
Cca02g01479 335 PANTHER CYCLIN 1 330 IPR043198 GO:0006357|GO:0016538
Cca02g01479 335 MobiDBLite consensus disorder prediction 301 335 - -
Cca02g01479 335 Gene3D - 64 175 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01479 1 280 Core Cell Cycle Gene Families AT5G27620 66.071 5.02e-137 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01479 K06634 - gmx:547736 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01479 02 33410240 33416793 Cca02g01479 02 33410240 33416793 ECH