Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01465 ATGGCTTGTGGCTCTGAGCATTTCACCATGATCTTCGTCATCATAACCCTCTTGGTGCTCCTATCATCACAAAGAACCCACATTTTGACTCTATTCAATGCAGTGGGAAGCTTCCAAGCTCACGTCATTCAAGAGAACAATGAAAAGCAGATTGAGAAAATCTCAGGACTTGATGAGAATGAAGAGAAGCAAGCCTTGATAGTGGAAAAGTTTAGATCCTTGATTGGTCTCAAGAGTTTCCACACCAAAGTACCATCCAATGGTGATTTGGAGTTACTCtctccctcaccttctccatcacccttcattgaagaatctcaagctccatctccttctccttctcctGTTCCACACGTGCACCCTCATTATCATCCACGGCATCATAAGAGTCCACCACTTCACAAAACTCACCATGAAGATAGAGGCAGGGCCAAAAGAATACTAATAGCGATTCTTGTGTCAGCGGGGGTTGCTACATTGATTGGTGCTTGTGGATTATTCTTGGTGTGGAGGAGACTCACAAATCAAGCAAAGAAACCCAAAAGGACAATGCCTCTATGTAGCAGCAAGAGCAAGGAAAAAGGAGGTGCTTATCAAAGTTCATCAAGCAAGGTGAGTTTAAACTCAGGACTAGATCTGTTTTATCTTAATGCTTTAGGTGAGGACATAGAGCAACATGCTTGCAACTTGAACAAGACTTGCAAGGAAGGCTTAGAATATGACAATGTTAGTGGTTCTTCCACTAAGGAAATTGCATCTGTTCATGAAGATGTGGAATCAGTGACAGGTGAAGATGAATCTGATGGAGGCAACTCTTCTTCTGGAGATAGAATTGTCCCTGAAGATTGCCATTCATCAGATAATGAAAGTTTTCATTCCTTTGTTGATTCACACTCAAATAATAGACTCTCCAATGCTTCAGCTGGTAGTATTACTATCAGTGACACGCAATCTCTTACTCATTCACCAAATAGTCCAAAACATGAAGAGATTGAGAACTCTGTCCAATGTCCAAAATCGTTGACTtcccctcttccacctcctcctcctccatcacctcctcctcccccacctccaccATTGCAAATGCCATTATTTTCTTTGCATTCTCTCACTTCCTTGTCTAGAGTCTCCTCTCATTCCCCACTTTCTTTGACATCTAATAACTTATCATCTCCCATAAATTCAGATACTTTCTCAGGTTCAAATCAAAGTCCAGATAAAGAGTTGCCTTCTCCACATGGACCTTACGCTACACAATCTCCCCCCAATATTCCCCCACCACCATGCCCTCCTCCATTTCTTAAAGGCAATAGTCACAGTTCCAAAACCCCACCTCCTCCACCATCTCAATTCCCTCAATTCACCCCACTTGGTAAAGATGGTGCACCCTTGCCAAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCCGCACCAAATCGCACAATGGTTTGGGATAAGCTACGATCAAGCTCATTCGAGTTGGATGAGGAAATGATCGAGTCTCTTTTTGGTTACAATTTGCAAAATTCAATTAAGAACGACGAAACAAAGAGTAAAACCCCATCTCCAAGCAAACATGTACTTGAGCCAAAACGCCTGCAGAACATAACCATACTCTCGAAAGCTCTGAATGCGACAGCTGAGCATGTCTGTGATGAGGCCTTAATGCAAGGGAAGGGGTTGTCTTTGCCACAACTAGAGGCACTAGTGAAAATGGTACCTACCAAGGAGGAAGAGTCCAAACTCATAAATTATAAAGGTGACATCAATGAATTGGGGTCCGCCGAAAGGTTCGTGAGGTCAATGCTTGAGGTGCCATTTGCTTTTCAAAGGGTAGAAGGCATGCTTTTCAGAGAGACATTTGATGATGAAGTAGTCCACCTCAGAAACTCATTCTCAATGCTCGAGGAAGCATGCAAGGAGCTACGATCAAGCAGGCTCTTCCTGAAGTTGCTAGAAGCAGTGCTGAAAACGGGGAACCGCATGAACGTTGGAACAATCAGAGGAGGTGCTAGAGCATTCAAACTCGACGCCCTTCTCAAGCTTTCAGACGTTAAAGGAACCGATGGCAAAACCACGTTGCTCCATTTCGTCGTTCAGGAGATTGTTCGTGCAGAAGGAATAAAAGTTTCAGACAGCATCATGGGGAAAATCAGCCAGAGAAGCAAGAACCGAACGGAGGAAGAGAAGGAAGAAGACTACAAGAGAATGGGACTAGAACTCGTGTCTGGCCTCAGCACCGAGTTATACAACGTGAAGAAAACAGCCACAATTGACTTGGACGTACTTGCAAGCTCTGTCTCGAACCTTTCAGAAGGAATGGCGAAGCTGCAGCGTGTGGTGGAGGAGTTGCATGGGGATGAGAGGAGCGTGAACTTTGTGCGCTCCATGAAGTGGTTCCTGAACTATGGTGATGGGAACCTCAAGGAGCTGCGAGGAGATGAAGATAGAGTGTTGGCACGTGTGAAAGAGATTACGGAGTATTTTCATGGGGATGTTGTGAGCAAAGAAGATGTGAACCCGCTTAGGATATTTGTGATTGTGAGAGATTTTCTGGGGATGTTGGATAATGTCTGTAAAGAACTTAGGAGGTCTAAAGCTTCACGTAGCCCCAATCCTCTTGTTATGCTCCCTTTAGATAGATCCTAG 2655 0.4192 MACGSEHFTMIFVIITLLVLLSSQRTHILTLFNAVGSFQAHVIQENNEKQIEKISGLDENEEKQALIVEKFRSLIGLKSFHTKVPSNGDLELLSPSPSPSPFIEESQAPSPSPSPVPHVHPHYHPRHHKSPPLHKTHHEDRGRAKRILIAILVSAGVATLIGACGLFLVWRRLTNQAKKPKRTMPLCSSKSKEKGGAYQSSSSKVSLNSGLDLFYLNALGEDIEQHACNLNKTCKEGLEYDNVSGSSTKEIASVHEDVESVTGEDESDGGNSSSGDRIVPEDCHSSDNESFHSFVDSHSNNRLSNASAGSITISDTQSLTHSPNSPKHEEIENSVQCPKSLTSPLPPPPPPSPPPPPPPPLQMPLFSLHSLTSLSRVSSHSPLSLTSNNLSSPINSDTFSGSNQSPDKELPSPHGPYATQSPPNIPPPPCPPPFLKGNSHSSKTPPPPPSQFPQFTPLGKDGAPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQNSIKNDETKSKTPSPSKHVLEPKRLQNITILSKALNATAEHVCDEALMQGKGLSLPQLEALVKMVPTKEEESKLINYKGDINELGSAERFVRSMLEVPFAFQRVEGMLFRETFDDEVVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLSDVKGTDGKTTLLHFVVQEIVRAEGIKVSDSIMGKISQRSKNRTEEEKEEDYKRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLSEGMAKLQRVVEELHGDERSVNFVRSMKWFLNYGDGNLKELRGDEDRVLARVKEITEYFHGDVVSKEDVNPLRIFVIVRDFLGMLDNVCKELRRSKASRSPNPLVMLPLDRS 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01465 884 MobiDBLite consensus disorder prediction 253 365 - -
Cca02g01465 884 MobiDBLite consensus disorder prediction 102 119 - -
Cca02g01465 884 MobiDBLite consensus disorder prediction 120 134 - -
Cca02g01465 884 Gene3D Formin, FH2 domain 480 874 IPR042201 -
Cca02g01465 884 SMART it6_source 458 872 IPR015425 -
Cca02g01465 884 MobiDBLite consensus disorder prediction 180 204 - -
Cca02g01465 884 SUPERFAMILY Formin homology 2 domain (FH2 domain) 471 868 - -
Cca02g01465 884 ProSiteProfiles Formin homology-2 (FH2) domain profile. 458 883 IPR015425 -
Cca02g01465 884 MobiDBLite consensus disorder prediction 341 364 - -
Cca02g01465 884 MobiDBLite consensus disorder prediction 292 324 - -
Cca02g01465 884 MobiDBLite consensus disorder prediction 379 409 - -
Cca02g01465 884 PANTHER FORMIN-LIKE PROTEIN 7 877 - -
Cca02g01465 884 MobiDBLite consensus disorder prediction 379 469 - -
Cca02g01465 884 Pfam Formin Homology 2 Domain 462 857 IPR015425 -
Cca02g01465 884 MobiDBLite consensus disorder prediction 88 140 - -
Cca02g01465 884 PANTHER FORMIN-RELATED 7 877 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cca02g01465 884 MobiDBLite consensus disorder prediction 416 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01465 Cca-Chr2 33261485 33265569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01465 7 877 FH2 protein (formin) Gene Family AT3G05470 49.839 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01465 - - gmx:100793761 1323.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01465 02 33261485 33265569 Cca02g01465 02 33261485 33265569 ECH