Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01437 ATGAGTAGCACGGAATTATCTAATATGAAGCAACCACTTGTTCCGCTGGCAACCCTGATTGGCCGGGAGCTACGAAATGGAAAAAACGAAAAGCCTTTTGTGAAGTATGGGCAGGCTGGCTTGGCAAAGAAAGGAGAAGATTACTTTCTAATCAAGACAGATTGTCAGAGAGTTCCTGGGGATTCATCAACACTGTTTTCTGTCTTTGCGATCTTTGATGGGCATAATGGTATATCTGCTGCTATTTTTGCGAAGGAAAACATACTAAGTAATGTTATGAGTGCAATCCCGCAAGACATCAGTAGGGATGAGTGGCTTCAAGCTCTGCCTCGTGCTCTAGTTGCTAGTTTTGTAAAAACTGACATAGAATTTCAGAAAAAAGGGGAAACTTCTGGAACAACTGCTACATTTGTTGTGATTGATGGGTGGACTGTTACTGTTGCGTCTGTTGGGGATTCCCGTTGCATATTAGATACTCAGGGAGGTGTTGTTTCTCTCTTGACAGTTGATCACAGATTGGAAGAAAATGCAGAAGAGAGGGAACGCGTTACTGCCAGTGGTGGTGAAGTAGGTAGACTCAATGTATTTGGAGGCAATGAGGTAGGGCCTCTTCGCTGCTGGCCTGGTGGATTGTGCCTCTCTAGATCAATTGGTGACACAGACGTGGGAGAATTTATTGTGCCAATACCACACGTTAAGCAAGTGAAGCTTTCAAATGCGGGTGGAAGACTTATTATAGCTTCTGATGGTATTTGGGATGCTTTATCTTCTGATACGGCTGCCAAGTCATGCCGGGGTCTACCTGCAGAGCTTGCTGCAAAGCTGGTGGTTAAGGAAGCTCTAAGGTCAAGAGGGCTGAAGGATGATACAACTTGCCTTGTTGTAGATATTATTCCTTCAGACCATCCTGTGTTACCAACAATTCCCAGAAAGAAACATAATATGCTAAGTTCACTTCTCTTTGGAAAGAAATCTCAAAACACTACGAACAAAGGTACCAATAAGCTTTCTGCTGTTGGTGTTGTGGAGGAATTATTTGAAGAGGGTTCTGCAATGCTTACAGAGAGGTTGGGTAAGGATTTTCCGTCTAATATGAATTCTGGGATTTTCCGCTGTGCGGTTTGCCAAGCAGATCAACCCTCTGGAGATGGTTTATCAATGAACACTGGATCTTTTTTCTCTCCAGCATCTAAGCCATGGGAAGGTCCATTCCTCTGCACAAACTGTCAGAAGAAGAAAGATGCCATGGAAGGAAAAAGGTCTTCAGAGACAGCATAG 1278 0.4374 MSSTELSNMKQPLVPLATLIGRELRNGKNEKPFVKYGQAGLAKKGEDYFLIKTDCQRVPGDSSTLFSVFAIFDGHNGISAAIFAKENILSNVMSAIPQDISRDEWLQALPRALVASFVKTDIEFQKKGETSGTTATFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDTAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPTIPRKKHNMLSSLLFGKKSQNTTNKGTNKLSAVGVVEELFEEGSAMLTERLGKDFPSNMNSGIFRCAVCQADQPSGDGLSMNTGSFFSPASKPWEGPFLCTNCQKKKDAMEGKRSSETA 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01437 425 SMART PP2C_SIG_2 50 297 IPR001932 -
Cca02g01437 425 CDD PP2Cc 43 297 IPR001932 -
Cca02g01437 425 Pfam Protein phosphatase 2C 63 280 IPR001932 -
Cca02g01437 425 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 423 - -
Cca02g01437 425 SUPERFAMILY PP2C-like 38 297 IPR036457 -
Cca02g01437 425 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
Cca02g01437 425 PANTHER ALPHABET, ISOFORM E-RELATED 2 423 - -
Cca02g01437 425 SMART PP2C_4 23 295 IPR001932 -
Cca02g01437 425 Gene3D - 33 301 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01437 Cca-Chr2 32938577 32941773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g01437 1 423 PP2C-type Phosphatase Gene Family AT1G09160 77.778 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01437 - - gmx:100794630 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01437 02 32938577 32941773 Cca02g01437 02 32938577 32941773 ECH